Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mir5122-201ENSMUST00000175004 89 ntBASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-4A0A0B4J1K2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav9-4A0A0B4J1K2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Gm38027-201ENSMUST00000192315 235 ntBASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Gm5417-201ENSMUST00000079706 384 ntBASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-4A0A0B4J1K2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms