Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trbv3A0A0A6YYE2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv3A0A0A6YYE2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv3A0A0A6YYE2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv3A0A0A6YYE2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Gm38285-201ENSMUST00000192928 922 ntBASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv3A0A0A6YYE2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms