Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-2A0A075B638 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Gm43017-201ENSMUST00000198296 752 ntBASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-2A0A075B638 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-2A0A075B638 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-2A0A075B638 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-2A0A075B638 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms