Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-1A0A075B5Z8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-1A0A075B5Z8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-1A0A075B5Z8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-1A0A075B5Z8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-1A0A075B5Z8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav6-1A0A075B5Z8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm10138-203ENSMUST00000206952 366 ntBASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-1A0A075B5Z8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms