Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm26476-201ENSMUST00000122618 313 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm22718-201ENSMUST00000122701 315 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm22036-201ENSMUST00000157279 215 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm20923-201ENSMUST00000190009 319 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm21088-201ENSMUST00000190875 316 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm37586-201ENSMUST00000193654 204 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm44927-201ENSMUST00000207573 716 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm20039-201ENSMUST00000210329 394 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm6012-201ENSMUST00000210821 730 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm25141-201ENSMUST00000083177 107 ntBASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
H2afb3S4R1G7 Gm381-201ENSMUST00000117443 2037 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm22194-201ENSMUST00000116869 95 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm14622-201ENSMUST00000117117 468 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm14570-201ENSMUST00000119444 391 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm7327-201ENSMUST00000120925 652 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm6079-201ENSMUST00000121356 404 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm11403-201ENSMUST00000122195 369 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm26045-201ENSMUST00000157862 97 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm24534-201ENSMUST00000157949 291 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm23023-201ENSMUST00000158767 109 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm17119-201ENSMUST00000163943 280 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm7953-201ENSMUST00000168278 469 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Mir5098-201ENSMUST00000175320 82 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm8600-201ENSMUST00000186320 905 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm18551-201ENSMUST00000195594 642 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm43115-201ENSMUST00000196244 160 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm44063-201ENSMUST00000203307 376 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm18016-201ENSMUST00000216119 801 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm23406-201ENSMUST00000082537 122 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm24950-201ENSMUST00000082768 191 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm23679-201ENSMUST00000083161 119 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm23971-201ENSMUST00000083317 191 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm26164-201ENSMUST00000083793 104 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm23849-201ENSMUST00000083833 191 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Gm26316-201ENSMUST00000083886 191 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.37□□□□□ -1.87
H2afb3S4R1G7 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
H2afb3S4R1G7 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm23422-201ENSMUST00000102000 107 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm24281-201ENSMUST00000104234 136 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm14657-201ENSMUST00000117461 302 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm15844-201ENSMUST00000118016 576 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm12779-201ENSMUST00000121496 143 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm6058-201ENSMUST00000154261 399 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm24666-201ENSMUST00000158937 167 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm23725-201ENSMUST00000177876 107 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm10067-201ENSMUST00000179462 348 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm28860-201ENSMUST00000188103 313 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm30280-201ENSMUST00000192214 262 ntBASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb3S4R1G7 Gm44391-201ENSMUST00000198490 93 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms