Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm7415-201ENSMUST00000178205 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7398-201ENSMUST00000178589 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7391-201ENSMUST00000178680 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm2092-201ENSMUST00000178887 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm7375-201ENSMUST00000179232 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm2759-201ENSMUST00000179938 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm3681-201ENSMUST00000179940 639 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Mir30d-201ENSMUST00000083503 82 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm14927-201ENSMUST00000120283 454 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm23783-201ENSMUST00000157941 102 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm17062-201ENSMUST00000166987 461 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm35931-201ENSMUST00000203931 448 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm44266-201ENSMUST00000205235 500 ntBASIC1.85□□□□□ -2.11
Scn11aQ9R053 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.84□□□□□ -2.11
Scn11aQ9R053 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Scn11aQ9R053 Gm7123-201ENSMUST00000117647 213 ntBASIC1.84□□□□□ -2.12
Scn11aQ9R053 Gm12880-201ENSMUST00000120652 494 ntBASIC1.84□□□□□ -2.12
Scn11aQ9R053 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.84□□□□□ -2.12
Scn11aQ9R053 Gm17064-201ENSMUST00000167690 452 ntBASIC1.84□□□□□ -2.12
Scn11aQ9R053 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.12
Scn11aQ9R053 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.84□□□□□ -2.12
Scn11aQ9R053 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Scn11aQ9R053 Gm12383-201ENSMUST00000120628 760 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm13460-201ENSMUST00000121274 353 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm11819-201ENSMUST00000122192 372 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm27044-201ENSMUST00000183033 796 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Mir6379-201ENSMUST00000183392 115 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm27493-201ENSMUST00000184128 78 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm28058-201ENSMUST00000186421 264 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm28951-201ENSMUST00000190742 313 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm32033-201ENSMUST00000193483 339 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm37431-201ENSMUST00000195102 111 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Mir7217-201ENSMUST00000200304 62 ntBASIC1.83□□□□□ -2.12
Scn11aQ9R053 Gm11248-201ENSMUST00000119568 201 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm23122-201ENSMUST00000157645 103 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm19089-201ENSMUST00000197207 613 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm22897-201ENSMUST00000197860 128 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm45189-201ENSMUST00000208567 363 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.82□□□□□ -2.12
Scn11aQ9R053 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm3104-201ENSMUST00000171004 473 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm43489-201ENSMUST00000196810 993 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm35570-201ENSMUST00000198730 681 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm24406-201ENSMUST00000083026 128 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm26126-201ENSMUST00000083188 164 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.82□□□□□ -2.12
Scn11aQ9R053 Gm11350-201ENSMUST00000121436 870 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Mir5098-201ENSMUST00000175320 82 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm44349-201ENSMUST00000197048 123 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Mir219b-201ENSMUST00000198317 65 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm44076-201ENSMUST00000203072 520 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm22740-201ENSMUST00000083439 109 ntBASIC1.81□□□□□ -2.12
Scn11aQ9R053 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Scn11aQ9R053 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm9440-201ENSMUST00000119667 539 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Scn11aQ9R053 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Scn11aQ9R053 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm22698-201ENSMUST00000175375 108 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm22565-201ENSMUST00000175540 69 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Mir6351-201ENSMUST00000183826 99 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm37281-201ENSMUST00000192412 439 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm43115-201ENSMUST00000196244 160 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.8□□□□□ -2.12
Scn11aQ9R053 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.8□□□□□ -2.12
Scn11aQ9R053 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.79□□□□□ -2.12
Scn11aQ9R053 Mir1192-201ENSMUST00000116976 121 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm6829-201ENSMUST00000119858 360 ntBASIC1.79□□□□□ -2.12
Scn11aQ9R053 Gm2855-201ENSMUST00000166765 456 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms