Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.51□□□□□ -1.53
Msh5Q9QUM7 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm14536-201ENSMUST00000118324 138 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm15357-201ENSMUST00000119160 285 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm12237-201ENSMUST00000120158 470 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm12897-201ENSMUST00000120341 250 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm15027-201ENSMUST00000120922 138 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm26372-201ENSMUST00000157831 236 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm10087-201ENSMUST00000167650 330 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm5967-201ENSMUST00000172723 494 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm23450-201ENSMUST00000178285 91 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm6055-201ENSMUST00000180532 378 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm28830-201ENSMUST00000188192 213 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm18470-201ENSMUST00000207467 420 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm18464-201ENSMUST00000207803 420 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm45791-201ENSMUST00000212908 352 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm22421-201ENSMUST00000083058 107 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Mir34c-201ENSMUST00000083653 77 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Msh5Q9QUM7 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 BC051076-202ENSMUST00000199477 2868 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Gm24232-201ENSMUST00000104314 132 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Gm28660-201ENSMUST00000186496 253 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.49□□□□□ -1.53
Msh5Q9QUM7 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Msh5Q9QUM7 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm17014-201ENSMUST00000120765 168 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm23539-201ENSMUST00000157537 224 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm22518-201ENSMUST00000158267 68 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm28409-201ENSMUST00000187064 103 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm43444-201ENSMUST00000198123 291 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 AC142499.1-201ENSMUST00000220036 374 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 AC134601.1-201ENSMUST00000221058 109 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.48□□□□□ -1.53
Msh5Q9QUM7 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.47□□□□□ -1.53
Msh5Q9QUM7 n-R5s32-201ENSMUST00000122495 103 ntBASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Gm25543-201ENSMUST00000122678 312 ntBASIC5.47□□□□□ -1.53
Msh5Q9QUM7 Gm23774-201ENSMUST00000158990 131 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms