Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm14739-201ENSMUST00000120424 802 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm12607-201ENSMUST00000120724 493 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm15190-201ENSMUST00000120855 276 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm23538-201ENSMUST00000157535 101 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm25667-201ENSMUST00000157701 275 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm5473-201ENSMUST00000179326 642 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm27374-201ENSMUST00000183660 81 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm27773-201ENSMUST00000184087 78 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm38231-201ENSMUST00000192030 347 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm43402-201ENSMUST00000197159 159 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Trem1Q9JKE2 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm12045-201ENSMUST00000122122 573 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm25321-201ENSMUST00000122558 102 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm25294-201ENSMUST00000122791 104 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm24998-201ENSMUST00000157908 89 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm19898-201ENSMUST00000177490 251 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm27834-201ENSMUST00000183427 125 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm19224-201ENSMUST00000190477 793 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm5317-201ENSMUST00000204445 847 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm44688-201ENSMUST00000209083 537 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trem1Q9JKE2 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm25466-201ENSMUST00000103995 132 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm22543-201ENSMUST00000104347 94 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm11576-201ENSMUST00000117433 417 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm13803-201ENSMUST00000117547 489 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm8880-201ENSMUST00000121800 454 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm24505-201ENSMUST00000157682 126 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm3102-201ENSMUST00000164236 489 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm21726-201ENSMUST00000179654 392 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Mir6899-201ENSMUST00000184798 64 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm45551-201ENSMUST00000211459 928 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm24948-201ENSMUST00000082866 207 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trem1Q9JKE2 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm15497-201ENSMUST00000119137 551 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm15038-201ENSMUST00000122144 296 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm9071-201ENSMUST00000165915 474 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm17164-201ENSMUST00000169013 506 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm20672-201ENSMUST00000176605 261 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm26297-201ENSMUST00000179464 132 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm23648-201ENSMUST00000180301 107 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm38311-201ENSMUST00000192945 165 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm44125-201ENSMUST00000203068 448 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trem1Q9JKE2 Gm26437-201ENSMUST00000082595 105 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms