Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Smco4Q9JIS3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Smco4Q9JIS3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm23747-201ENSMUST00000104228 131 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm24982-201ENSMUST00000104456 132 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm15183-201ENSMUST00000118933 348 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm11598-201ENSMUST00000119257 357 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm4468-201ENSMUST00000170206 294 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm43901-201ENSMUST00000203247 453 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 AC137871.2-201ENSMUST00000226482 289 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Smco4Q9JIS3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm14770-201ENSMUST00000122197 312 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm22718-201ENSMUST00000122701 315 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm6395-201ENSMUST00000167639 691 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm17186-201ENSMUST00000171742 456 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm25996-201ENSMUST00000175393 117 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm29330-201ENSMUST00000190032 699 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm28098-201ENSMUST00000191361 699 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm37732-201ENSMUST00000194377 316 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm34701-202ENSMUST00000204685 360 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Smco4Q9JIS3 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.04□□□□□ -2.24
Smco4Q9JIS3 Gm36962-201ENSMUST00000192114 1761 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm14907-201ENSMUST00000121948 854 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm25961-201ENSMUST00000157174 135 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm3102-201ENSMUST00000164236 489 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm17038-201ENSMUST00000166586 494 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm20450-201ENSMUST00000173652 147 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm22192-201ENSMUST00000175128 85 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm25994-201ENSMUST00000175392 101 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm23617-201ENSMUST00000175410 95 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm37029-201ENSMUST00000195773 239 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm6590-201ENSMUST00000203343 687 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Zmym2-202ENSMUST00000223669 1281 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm25632-201ENSMUST00000083112 85 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.03□□□□□ -2.24
Smco4Q9JIS3 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.03□□□□□ -2.25
Smco4Q9JIS3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.03□□□□□ -2.25
Smco4Q9JIS3 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm25529-201ENSMUST00000104850 92 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm23551-201ENSMUST00000116852 121 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm15536-201ENSMUST00000121411 114 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm27468-201ENSMUST00000183577 106 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm44794-201ENSMUST00000206550 411 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm44585-201ENSMUST00000207150 607 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Mir107-201ENSMUST00000083660 87 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm24817-201ENSMUST00000093672 105 ntBASIC1.02□□□□□ -2.25
Smco4Q9JIS3 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Gm11483-201ENSMUST00000119839 247 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Gm23887-201ENSMUST00000122683 172 ntBASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.01□□□□□ -2.25
Smco4Q9JIS3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms