Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mir6993-201ENSMUST00000184912 65 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm19147-201ENSMUST00000199622 652 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm7624-201ENSMUST00000209702 435 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm26228-201ENSMUST00000082512 107 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm25080-201ENSMUST00000082526 107 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm22304-201ENSMUST00000082688 129 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Gm25518-201ENSMUST00000083864 107 ntBASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim54Q9ERP3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm25376-201ENSMUST00000104340 133 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm12806-201ENSMUST00000119384 268 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm11785-201ENSMUST00000120165 601 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm11582-201ENSMUST00000121041 236 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 AA413626-201ENSMUST00000121125 494 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm16428-201ENSMUST00000121193 723 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm14810-201ENSMUST00000121628 486 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm7654-201ENSMUST00000186738 683 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm9227-201ENSMUST00000194733 566 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm36953-201ENSMUST00000195295 268 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm19620-201ENSMUST00000195972 434 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm44594-201ENSMUST00000208982 407 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm18921-201ENSMUST00000221798 366 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm23093-201ENSMUST00000083450 102 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.61□□□□□ -1.83
Trim54Q9ERP3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim54Q9ERP3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm11577-201ENSMUST00000118030 737 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm13368-201ENSMUST00000122443 430 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm25624-201ENSMUST00000157222 275 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm25283-201ENSMUST00000157272 77 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm24552-201ENSMUST00000158646 103 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm27535-201ENSMUST00000183814 157 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Mir6383-201ENSMUST00000184545 116 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm28390-201ENSMUST00000185212 700 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm19641-201ENSMUST00000188432 417 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm43550-201ENSMUST00000200597 303 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm19244-201ENSMUST00000204340 253 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm45101-201ENSMUST00000208327 232 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim54Q9ERP3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm14638-201ENSMUST00000121338 216 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm23791-201ENSMUST00000122553 293 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm24627-201ENSMUST00000122764 138 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm25341-201ENSMUST00000157461 268 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm22722-201ENSMUST00000157467 132 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm26041-201ENSMUST00000158148 108 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm23068-201ENSMUST00000158239 293 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm22833-201ENSMUST00000158292 132 ntBASIC3.59□□□□□ -1.83
Trim54Q9ERP3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim54Q9ERP3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms