Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Mir3066-201ENSMUST00000175296 83 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Mir6372-201ENSMUST00000185114 109 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm29516-201ENSMUST00000190402 468 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm28951-201ENSMUST00000190742 313 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm32033-201ENSMUST00000193483 339 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm45551-201ENSMUST00000211459 928 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm5374-201ENSMUST00000222868 657 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm650-201ENSMUST00000144428 1551 ntBASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Lima1Q9ERG0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm12006-201ENSMUST00000120786 403 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm25120-201ENSMUST00000180148 79 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm29604-201ENSMUST00000187176 163 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm29184-201ENSMUST00000190038 334 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm37213-201ENSMUST00000193077 586 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm44818-201ENSMUST00000206608 358 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Lima1Q9ERG0 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.15□□□□□ -2.06
Lima1Q9ERG0 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Lima1Q9ERG0 Gm24274-201ENSMUST00000116787 124 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm6954-201ENSMUST00000117416 225 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm14794-201ENSMUST00000118181 192 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm12513-201ENSMUST00000118617 352 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm24075-201ENSMUST00000158175 72 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm23473-201ENSMUST00000158883 116 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm20698-201ENSMUST00000175657 233 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm26960-201ENSMUST00000182263 412 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm28011-201ENSMUST00000184097 175 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm28439-201ENSMUST00000187714 876 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm29192-201ENSMUST00000190942 377 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.15□□□□□ -2.07
Lima1Q9ERG0 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm43659-201ENSMUST00000200894 628 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm45614-201ENSMUST00000209994 721 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Gm18026-201ENSMUST00000222789 727 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Lima1Q9ERG0 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Lima1Q9ERG0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm25313-201ENSMUST00000101817 116 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm14600-201ENSMUST00000121032 630 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm16354-201ENSMUST00000155376 150 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm26101-201ENSMUST00000157246 105 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm23391-201ENSMUST00000157579 104 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm25863-201ENSMUST00000158249 329 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm23287-201ENSMUST00000179427 116 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm23143-201ENSMUST00000180137 116 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Mir6925-201ENSMUST00000197857 70 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Gm45173-201ENSMUST00000206819 305 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.14□□□□□ -2.07
Lima1Q9ERG0 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 123.6 ms