Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm14877-201ENSMUST00000119803 478 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm14600-201ENSMUST00000121032 630 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm37431-201ENSMUST00000195102 111 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm7675-201ENSMUST00000208828 686 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm45316-201ENSMUST00000210128 162 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm12513-201ENSMUST00000118617 352 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm12137-201ENSMUST00000119565 346 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm43541-201ENSMUST00000197208 581 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Gm44634-201ENSMUST00000206119 152 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn4aQ9ER60 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm14794-201ENSMUST00000118181 192 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm13082-201ENSMUST00000118877 561 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm27342-201ENSMUST00000183530 109 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm43070-201ENSMUST00000196938 415 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm43493-201ENSMUST00000199837 202 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm25202-201ENSMUST00000082838 191 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm23452-201ENSMUST00000083327 107 ntBASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn4aQ9ER60 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Gm15108-201ENSMUST00000116160 803 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Gm15111-201ENSMUST00000122142 878 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Gm37455-201ENSMUST00000191993 529 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Scn4aQ9ER60 AC164629.4-201ENSMUST00000218505 3247 ntBASIC3.03□□□□□ -1.92
Scn4aQ9ER60 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm15110-201ENSMUST00000117545 881 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm23312-201ENSMUST00000158774 102 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Gm7984-201ENSMUST00000060640 538 ntBASIC3.03□□□□□ -1.93
Scn4aQ9ER60 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm22036-201ENSMUST00000157279 215 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm22186-201ENSMUST00000157822 122 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm23034-201ENSMUST00000158001 147 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm28794-201ENSMUST00000185276 136 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 AC132384.11-201ENSMUST00000219676 178 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.02□□□□□ -1.93
Scn4aQ9ER60 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm26439-201ENSMUST00000082592 106 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Gm22293-201ENSMUST00000083314 109 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Mir200b-201ENSMUST00000083615 70 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Mir465-201ENSMUST00000093563 74 ntBASIC3.02□□□□□ -1.93
Scn4aQ9ER60 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm13419-201ENSMUST00000121711 271 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm2855-201ENSMUST00000166765 456 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm27894-201ENSMUST00000184177 92 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm38268-201ENSMUST00000195813 193 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm9628-201ENSMUST00000222169 725 ntBASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Scn4aQ9ER60 Gm16053-201ENSMUST00000120511 188 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3□□□□□ -1.93
Scn4aQ9ER60 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm35262-201ENSMUST00000215133 267 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm18729-201ENSMUST00000217230 621 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 AC120540.1-201ENSMUST00000221879 324 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 AC118639.1-201ENSMUST00000227204 338 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm22245-201ENSMUST00000082479 103 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm24098-201ENSMUST00000102075 109 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm25381-201ENSMUST00000102078 109 ntBASIC3□□□□□ -1.93
Scn4aQ9ER60 Gm24096-201ENSMUST00000103905 110 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms