Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.95□□□□□ -2.1
Cpsf1Q9EPU4 Gm43723-201ENSMUST00000196886 189 ntBASIC1.95□□□□□ -2.1
Cpsf1Q9EPU4 Mir6962-201ENSMUST00000199512 63 ntBASIC1.95□□□□□ -2.1
Cpsf1Q9EPU4 Gm43224-201ENSMUST00000201567 898 ntBASIC1.95□□□□□ -2.1
Cpsf1Q9EPU4 Gm43974-201ENSMUST00000205080 684 ntBASIC1.95□□□□□ -2.1
Cpsf1Q9EPU4 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm26352-201ENSMUST00000158223 125 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm24154-201ENSMUST00000175261 130 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Mir7059-201ENSMUST00000184825 59 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm28872-201ENSMUST00000191518 158 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Gm18892-201ENSMUST00000217628 881 ntBASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cpsf1Q9EPU4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm2830-201ENSMUST00000140330 385 ntBASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm38018-201ENSMUST00000195651 540 ntBASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm19244-201ENSMUST00000204340 253 ntBASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm25199-201ENSMUST00000083095 104 ntBASIC1.93□□□□□ -2.1
Cpsf1Q9EPU4 Gm43047-201ENSMUST00000200089 3460 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm12706-201ENSMUST00000121588 698 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm26049-201ENSMUST00000157313 108 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm11395-201ENSMUST00000181011 499 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm37684-201ENSMUST00000192779 355 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.92□□□□□ -2.1
Cpsf1Q9EPU4 Gm17113-201ENSMUST00000170118 171 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Mir7052-201ENSMUST00000184821 65 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 AC137950.3-201ENSMUST00000228250 246 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm13409-201ENSMUST00000122072 546 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm25976-201ENSMUST00000158695 130 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm9613-201ENSMUST00000171662 196 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Gm24252-201ENSMUST00000083700 132 ntBASIC1.91□□□□□ -2.1
Cpsf1Q9EPU4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Cpsf1Q9EPU4 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Cpsf1Q9EPU4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Mir343-201ENSMUST00000102360 75 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm22963-201ENSMUST00000157960 91 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm22158-201ENSMUST00000158411 126 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm17946-201ENSMUST00000186856 538 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Gm44634-201ENSMUST00000206119 152 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Cpsf1Q9EPU4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm8151-201ENSMUST00000184817 871 ntBASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm45754-201ENSMUST00000212380 279 ntBASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 AC129323.1-201ENSMUST00000216733 470 ntBASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.89□□□□□ -2.11
Cpsf1Q9EPU4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Gm13273-201ENSMUST00000119737 159 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Gm25341-201ENSMUST00000157461 268 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Gm22839-201ENSMUST00000158436 304 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Gm42960-201ENSMUST00000202160 241 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 Gm29809-201ENSMUST00000218423 493 ntBASIC1.88□□□□□ -2.11
Cpsf1Q9EPU4 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 Gm25625-201ENSMUST00000157221 96 ntBASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 Gm28151-201ENSMUST00000189404 951 ntBASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 Gm19457-201ENSMUST00000200995 448 ntBASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 Gm24624-201ENSMUST00000082617 164 ntBASIC1.87□□□□□ -2.11
Cpsf1Q9EPU4 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm6429-201ENSMUST00000117144 475 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm12235-201ENSMUST00000118596 170 ntBASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.86□□□□□ -2.11
Cpsf1Q9EPU4 Gm23329-201ENSMUST00000157415 108 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms