Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44523-201ENSMUST00000205616 417 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm25134-201ENSMUST00000082646 160 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Upf1Q9EPU0 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm14841-201ENSMUST00000121067 758 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm23214-201ENSMUST00000122716 157 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm24819-201ENSMUST00000175094 166 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Mir8106-201ENSMUST00000184520 139 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm27952-201ENSMUST00000184748 105 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm27624-201ENSMUST00000185047 177 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm32033-201ENSMUST00000193483 339 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm43284-201ENSMUST00000200103 253 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm7117-201ENSMUST00000071515 387 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm22423-201ENSMUST00000082861 184 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gm25207-201ENSMUST00000093745 107 ntBASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf1Q9EPU0 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Mir701-201ENSMUST00000102208 109 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Mir743b-201ENSMUST00000104751 77 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm13717-201ENSMUST00000119868 365 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm11718-201ENSMUST00000119942 537 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm11645-201ENSMUST00000121589 649 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm22107-201ENSMUST00000122548 100 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm5958-201ENSMUST00000147698 297 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm27245-201ENSMUST00000184385 376 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm37300-201ENSMUST00000193327 280 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm37001-201ENSMUST00000193377 190 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm37601-201ENSMUST00000194922 394 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm45162-201ENSMUST00000209013 618 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm23721-201ENSMUST00000083005 107 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Gm25411-201ENSMUST00000083760 151 ntBASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Upf1Q9EPU0 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm15613-201ENSMUST00000118396 326 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm15106-201ENSMUST00000119691 821 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm13443-201ENSMUST00000120770 555 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm22037-201ENSMUST00000157280 296 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm24191-201ENSMUST00000157977 122 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm20534-201ENSMUST00000172957 172 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm27410-201ENSMUST00000183851 115 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm28282-201ENSMUST00000186072 186 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm44446-201ENSMUST00000204864 255 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Upf1Q9EPU0 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.66□□□□□ -1.66
Upf1Q9EPU0 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms