Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44058-201ENSMUST00000204335 467 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Gm6369-201ENSMUST00000069626 412 ntBASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cdc40Q9DC48 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm24126-201ENSMUST00000104111 106 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm14751-201ENSMUST00000117693 222 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm13603-201ENSMUST00000119404 83 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm12607-201ENSMUST00000120724 493 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm14982-201ENSMUST00000121102 442 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm12238-201ENSMUST00000127764 124 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm16218-201ENSMUST00000155424 388 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm25707-201ENSMUST00000175120 96 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm24086-201ENSMUST00000175171 98 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Mir5099-201ENSMUST00000175257 74 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm24813-201ENSMUST00000175310 84 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Mir7014-201ENSMUST00000183853 63 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm27608-201ENSMUST00000184822 162 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm28438-201ENSMUST00000188299 345 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm28744-201ENSMUST00000189939 340 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm44395-201ENSMUST00000197056 153 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm43600-201ENSMUST00000202134 223 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm45048-201ENSMUST00000207058 429 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm6030-201ENSMUST00000078768 402 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.38□□□□□ -2.03
Cdc40Q9DC48 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm13555-201ENSMUST00000121668 319 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm6395-201ENSMUST00000167639 691 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm27428-201ENSMUST00000184289 110 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm19694-201ENSMUST00000192364 505 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm45049-201ENSMUST00000207586 591 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm45438-201ENSMUST00000210242 564 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm23249-201ENSMUST00000083369 161 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Gm22740-201ENSMUST00000083439 109 ntBASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdc40Q9DC48 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm24280-201ENSMUST00000104237 134 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm14651-201ENSMUST00000147192 442 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm26411-201ENSMUST00000157668 107 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Mir3066-201ENSMUST00000175296 83 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm7329-201ENSMUST00000185915 210 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm44041-201ENSMUST00000203678 396 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm44519-201ENSMUST00000206486 122 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm46193-201ENSMUST00000219399 364 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm25131-201ENSMUST00000082653 151 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Gm23096-201ENSMUST00000083447 107 ntBASIC2.36□□□□□ -2.03
Cdc40Q9DC48 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms