Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22005-201ENSMUST00000082795 141 ntBASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc3Q9D6Y1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm12155-201ENSMUST00000121267 160 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22764-201ENSMUST00000158370 92 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm27470-201ENSMUST00000184070 210 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Mir6905-201ENSMUST00000184228 70 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Mir3569-201ENSMUST00000185080 58 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm19193-201ENSMUST00000190263 590 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm19202-201ENSMUST00000198096 808 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm18982-201ENSMUST00000198118 529 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm19252-201ENSMUST00000204705 305 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm18453-201ENSMUST00000208000 626 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm45252-201ENSMUST00000211579 397 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm22806-201ENSMUST00000082738 136 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm25126-201ENSMUST00000083343 102 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Mir222-201ENSMUST00000083537 79 ntBASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Ccdc3Q9D6Y1 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23950-201ENSMUST00000104026 129 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm13913-201ENSMUST00000121126 260 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm25047-201ENSMUST00000122667 104 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23048-201ENSMUST00000157237 129 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm17538-201ENSMUST00000168236 327 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Mir5099-201ENSMUST00000175257 74 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm38041-201ENSMUST00000194445 661 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm45445-201ENSMUST00000209586 232 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm17890-201ENSMUST00000221419 757 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm46389-201ENSMUST00000223199 392 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23932-201ENSMUST00000082914 107 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm10780-201ENSMUST00000099459 285 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.18□□□□□ -2.06
Ccdc3Q9D6Y1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23230-201ENSMUST00000157298 133 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23473-201ENSMUST00000158883 116 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm24925-201ENSMUST00000178157 107 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm26960-201ENSMUST00000182263 412 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Mir6402-201ENSMUST00000183406 80 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm27869-201ENSMUST00000184327 122 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm20915-201ENSMUST00000191575 663 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm37708-201ENSMUST00000192337 895 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr815-201ENSMUST00000071557 951 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Mir423-201ENSMUST00000083584 109 ntBASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ccdc3Q9D6Y1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm13439-201ENSMUST00000117541 409 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm13640-201ENSMUST00000118445 264 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm12889-201ENSMUST00000118684 241 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm14588-201ENSMUST00000119895 172 ntBASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.16□□□□□ -2.06
Ccdc3Q9D6Y1 Gm23588-201ENSMUST00000157659 99 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms