Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm25808-201ENSMUST00000122784 284 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm24736-201ENSMUST00000158862 130 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm24968-201ENSMUST00000179817 107 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm19498-201ENSMUST00000191128 331 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm43224-201ENSMUST00000201567 898 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm44720-201ENSMUST00000206076 260 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm29817-201ENSMUST00000210098 172 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm25404-201ENSMUST00000082970 107 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm25792-201ENSMUST00000083289 100 ntBASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc39Q9D5Y1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm14794-201ENSMUST00000118181 192 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm14899-201ENSMUST00000118673 548 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm11943-201ENSMUST00000119473 327 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm23463-201ENSMUST00000122468 99 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm22416-201ENSMUST00000158590 88 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm25119-201ENSMUST00000158815 88 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm2855-201ENSMUST00000166765 456 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Mir3076-201ENSMUST00000175415 60 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm42665-201ENSMUST00000202100 586 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm24150-201ENSMUST00000082759 104 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm26458-201ENSMUST00000082832 128 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm4017-201ENSMUST00000084813 338 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.16□□□□□ -1.9
Ccdc39Q9D5Y1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.15□□□□□ -1.9
Ccdc39Q9D5Y1 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14159-201ENSMUST00000119832 451 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm22651-201ENSMUST00000157872 94 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm24393-201ENSMUST00000158135 97 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm26406-201ENSMUST00000158503 124 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm23409-201ENSMUST00000158516 237 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Mir6386-201ENSMUST00000183558 104 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm27861-201ENSMUST00000183920 214 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm18448-201ENSMUST00000186286 599 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm45023-201ENSMUST00000207951 379 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.15□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm6664-201ENSMUST00000119138 468 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm15452-201ENSMUST00000119877 240 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm11471-201ENSMUST00000121824 198 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm14821-201ENSMUST00000121975 435 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm26099-201ENSMUST00000157248 109 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm20660-201ENSMUST00000177515 289 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Gm18691-201ENSMUST00000203593 872 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.14□□□□□ -1.91
Ccdc39Q9D5Y1 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms