Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm25586-201ENSMUST00000082499 112 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 AF357341-201ENSMUST00000083088 75 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.31□□□□□ -1.88
Vps28Q9D1C8 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm24982-201ENSMUST00000104456 132 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm12515-201ENSMUST00000120116 361 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm14301-201ENSMUST00000120181 324 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm11891-201ENSMUST00000121241 619 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm27869-201ENSMUST00000184327 122 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Mir6371-201ENSMUST00000184470 111 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm29216-201ENSMUST00000187117 492 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm18433-202ENSMUST00000195682 196 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm2676-201ENSMUST00000207279 606 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Gm6842-201ENSMUST00000211361 390 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Vps28Q9D1C8 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm26423-201ENSMUST00000104277 128 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Mir1198-201ENSMUST00000116995 121 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm15282-201ENSMUST00000117707 300 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm12225-201ENSMUST00000117995 298 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm5937-201ENSMUST00000119715 643 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm13720-201ENSMUST00000120741 196 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm14736-201ENSMUST00000121470 336 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm11395-201ENSMUST00000181011 499 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm28356-202ENSMUST00000187566 858 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm5268-201ENSMUST00000189212 940 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm37085-201ENSMUST00000193780 196 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm42164-201ENSMUST00000198881 379 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Gm9845-201ENSMUST00000056409 598 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 AF357428-201ENSMUST00000083815 69 ntBASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Vps28Q9D1C8 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm13761-201ENSMUST00000117238 807 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm14020-201ENSMUST00000118165 662 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm13510-201ENSMUST00000118659 429 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm9119-201ENSMUST00000118866 495 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm14647-201ENSMUST00000119392 680 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm17538-201ENSMUST00000168236 327 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Trbv22-201ENSMUST00000191697 291 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm37428-201ENSMUST00000193886 137 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Trbv24-201ENSMUST00000194614 347 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm43899-201ENSMUST00000203675 246 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm43932-201ENSMUST00000204499 52 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm7948-201ENSMUST00000212607 844 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Vps28Q9D1C8 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Vps28Q9D1C8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
Vps28Q9D1C8 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Vps28Q9D1C8 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Vps28Q9D1C8 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Vps28Q9D1C8 Gm24890-201ENSMUST00000104389 102 ntBASIC3.27□□□□□ -1.89
Vps28Q9D1C8 Gm22496-201ENSMUST00000104493 88 ntBASIC3.27□□□□□ -1.89
Vps28Q9D1C8 Gm22497-201ENSMUST00000104499 131 ntBASIC3.27□□□□□ -1.89
Vps28Q9D1C8 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms