Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Ddx28Q9CWT6 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm13728-201ENSMUST00000117471 400 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm12782-201ENSMUST00000117519 727 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm15142-201ENSMUST00000121013 856 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm14581-201ENSMUST00000121726 198 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm12693-201ENSMUST00000121965 483 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm15077-201ENSMUST00000122344 362 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm12238-201ENSMUST00000127764 124 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm22380-201ENSMUST00000157479 95 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm22631-201ENSMUST00000179656 94 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Mir8106-201ENSMUST00000184520 139 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm37119-201ENSMUST00000195691 389 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm43227-201ENSMUST00000202239 677 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm45420-201ENSMUST00000211243 425 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm2710-201ENSMUST00000073196 603 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm4987-201ENSMUST00000078326 408 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm26228-201ENSMUST00000082512 107 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm25080-201ENSMUST00000082526 107 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gm25518-201ENSMUST00000083864 107 ntBASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ddx28Q9CWT6 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm13614-201ENSMUST00000117306 503 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm13873-201ENSMUST00000119208 427 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm15760-201ENSMUST00000119553 283 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm11522-201ENSMUST00000120533 176 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm11384-201ENSMUST00000121376 303 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm12276-201ENSMUST00000121709 301 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm14765-201ENSMUST00000121954 326 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm22755-201ENSMUST00000157143 100 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm26101-201ENSMUST00000157246 105 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm23124-201ENSMUST00000157650 107 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm24008-201ENSMUST00000157733 138 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm25519-201ENSMUST00000158392 127 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm25835-201ENSMUST00000158917 144 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Mir6338-201ENSMUST00000183389 109 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm21673-201ENSMUST00000186640 436 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm10193-201ENSMUST00000188288 231 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm21135-201ENSMUST00000189023 436 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm19193-201ENSMUST00000190263 590 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm8242-202ENSMUST00000193056 475 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm37616-201ENSMUST00000193974 322 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm9236-201ENSMUST00000196892 587 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm44011-201ENSMUST00000203336 394 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ddx28Q9CWT6 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm14159-201ENSMUST00000119832 451 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm8880-201ENSMUST00000121800 454 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm8840-201ENSMUST00000122454 386 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm22957-201ENSMUST00000122511 123 ntBASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.01□□□□□ -1.93
Ddx28Q9CWT6 Gm22792-201ENSMUST00000157225 133 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms