Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm32300-201ENSMUST00000221735 515 ntBASIC3.09□□□□□ -1.91
Smc1aQ9CU62 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.09□□□□□ -1.91
Smc1aQ9CU62 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Gm4945-201ENSMUST00000075152 453 ntBASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.09□□□□□ -1.91
Smc1aQ9CU62 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Smc1aQ9CU62 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm26341-201ENSMUST00000104561 134 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm12787-201ENSMUST00000119234 396 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm14506-201ENSMUST00000121165 536 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm14821-201ENSMUST00000121975 435 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm17166-201ENSMUST00000172006 431 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm25476-201ENSMUST00000175125 185 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm28745-201ENSMUST00000190069 305 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm34314-201ENSMUST00000203622 367 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm44041-201ENSMUST00000203678 396 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Gm6030-201ENSMUST00000078768 402 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Smc1aQ9CU62 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Mir466n-201ENSMUST00000104798 94 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm22072-201ENSMUST00000116850 121 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm12016-201ENSMUST00000119079 681 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm12935-201ENSMUST00000119352 246 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm12042-201ENSMUST00000120479 301 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm11384-201ENSMUST00000121376 303 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm13406-201ENSMUST00000121991 256 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm25637-201ENSMUST00000157529 107 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm23588-201ENSMUST00000157659 99 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm3221-201ENSMUST00000164869 440 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm17162-201ENSMUST00000168538 473 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Mir5123-201ENSMUST00000177794 83 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm21827-201ENSMUST00000178247 423 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm6801-201ENSMUST00000190697 339 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm18692-201ENSMUST00000193047 511 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm45288-201ENSMUST00000210236 151 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.07□□□□□ -1.92
Smc1aQ9CU62 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26504-201ENSMUST00000102033 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Mir883a-201ENSMUST00000104824 76 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm14794-201ENSMUST00000118181 192 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm11285-201ENSMUST00000118443 322 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm11219-201ENSMUST00000118565 358 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm9440-201ENSMUST00000119667 539 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm14867-201ENSMUST00000120156 866 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm14333-201ENSMUST00000130484 264 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25283-201ENSMUST00000157272 77 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26195-201ENSMUST00000175035 101 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26502-201ENSMUST00000177732 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm25350-201ENSMUST00000177849 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm23446-201ENSMUST00000177977 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm26201-201ENSMUST00000178047 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm24711-201ENSMUST00000178062 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm24609-201ENSMUST00000178166 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm23265-201ENSMUST00000178321 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Gm22812-201ENSMUST00000178329 94 ntBASIC3.06□□□□□ -1.92
Smc1aQ9CU62 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms