Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm29192-201ENSMUST00000190942 377 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Mir5121-201ENSMUST00000198528 74 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm19649-201ENSMUST00000201126 822 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm44824-201ENSMUST00000207021 229 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm45438-201ENSMUST00000210242 564 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm7948-201ENSMUST00000212607 844 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 AC171206.2-201ENSMUST00000215252 389 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm5471-201ENSMUST00000072732 337 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm650-201ENSMUST00000144428 1551 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.97□□□□□ -2.09
RTRAFQ9CQE8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm25764-201ENSMUST00000104092 134 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm14073-201ENSMUST00000117344 381 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm13085-201ENSMUST00000118356 171 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm5287-201ENSMUST00000120666 598 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm2830-201ENSMUST00000140330 385 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm24771-201ENSMUST00000158508 137 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm25977-201ENSMUST00000158697 85 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm17119-201ENSMUST00000163943 280 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm23268-201ENSMUST00000175494 78 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm25874-201ENSMUST00000178030 79 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm26177-201ENSMUST00000178683 107 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm23648-201ENSMUST00000180301 107 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Mir6541-201ENSMUST00000183649 110 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm28688-201ENSMUST00000187301 268 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm38053-201ENSMUST00000193938 160 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm19089-201ENSMUST00000197207 613 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 AC069074.2-201ENSMUST00000217819 428 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm46193-201ENSMUST00000219399 364 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm46389-201ENSMUST00000223199 392 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm23506-201ENSMUST00000083077 107 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm26494-201ENSMUST00000083154 143 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm24493-201ENSMUST00000083805 143 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.96□□□□□ -2.1
RTRAFQ9CQE8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Mir467h-201ENSMUST00000116759 121 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm14197-201ENSMUST00000117480 1049 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm15177-201ENSMUST00000120491 577 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm9225-201ENSMUST00000121921 836 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm25339-201ENSMUST00000157458 232 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm23667-201ENSMUST00000157466 120 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm25637-201ENSMUST00000157529 107 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm22765-201ENSMUST00000158371 128 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm6788-201ENSMUST00000166459 270 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm21816-201ENSMUST00000179255 360 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm7329-201ENSMUST00000185915 210 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm29600-201ENSMUST00000188687 377 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm18748-201ENSMUST00000198507 622 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm44125-201ENSMUST00000203068 448 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm45173-201ENSMUST00000206819 305 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm45513-201ENSMUST00000210228 376 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm3442-201ENSMUST00000216808 710 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm9068-201ENSMUST00000217393 455 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Gm25628-201ENSMUST00000084002 105 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.95□□□□□ -2.1
RTRAFQ9CQE8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms