Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.91□□□□□ -1.62
Trim11Q99PQ2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.9□□□□□ -1.62
Trim11Q99PQ2 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm14714-201ENSMUST00000119743 439 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm6574-201ENSMUST00000120037 362 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm8200-201ENSMUST00000122390 222 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm25264-201ENSMUST00000158519 117 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm20397-201ENSMUST00000174520 362 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Mir6903-201ENSMUST00000183597 88 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm20257-202ENSMUST00000188643 130 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm43402-201ENSMUST00000197159 159 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm44076-201ENSMUST00000203072 520 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm19908-201ENSMUST00000204684 391 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm44720-201ENSMUST00000206076 260 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm10813-201ENSMUST00000099936 90 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.9□□□□□ -1.63
Trim11Q99PQ2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm23990-201ENSMUST00000117031 117 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm22312-201ENSMUST00000158005 130 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm22328-201ENSMUST00000158074 112 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm22536-201ENSMUST00000158171 134 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm36934-201ENSMUST00000192007 306 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm37692-201ENSMUST00000192633 232 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm5002-201ENSMUST00000207145 223 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm39197-201ENSMUST00000212069 457 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm22297-201ENSMUST00000083312 106 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim11Q99PQ2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.89□□□□□ -1.63
Trim11Q99PQ2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm25938-201ENSMUST00000104139 166 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm15037-201ENSMUST00000120358 259 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm28020-201ENSMUST00000157739 67 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm15796-201ENSMUST00000162135 204 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm23151-201ENSMUST00000178061 107 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm25473-201ENSMUST00000180191 107 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Mir7006-201ENSMUST00000183624 69 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm27883-201ENSMUST00000183941 102 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm27387-201ENSMUST00000184583 116 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Mir195b-201ENSMUST00000184814 97 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm5329-201ENSMUST00000186898 463 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm43284-201ENSMUST00000200103 253 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm23741-201ENSMUST00000097237 171 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.88□□□□□ -1.63
Trim11Q99PQ2 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trim11Q99PQ2 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.87□□□□□ -1.63
Trim11Q99PQ2 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim11Q99PQ2 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.87□□□□□ -1.63
Trim11Q99PQ2 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms