Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdh23Q99PF4 Gm11582-201ENSMUST00000121041 236 ntBASIC1.19□□□□□ -2.22
Cdh23Q99PF4 Gm27161-201ENSMUST00000183960 562 ntBASIC1.19□□□□□ -2.22
Cdh23Q99PF4 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm45445-201ENSMUST00000209586 232 ntBASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm15530-201ENSMUST00000122206 555 ntBASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm15143-201ENSMUST00000178180 714 ntBASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.18□□□□□ -2.22
Cdh23Q99PF4 Gm6985-201ENSMUST00000121255 271 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm15116-201ENSMUST00000122248 663 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm22858-201ENSMUST00000174972 76 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm11357-201ENSMUST00000119758 954 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm14770-201ENSMUST00000122197 312 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm23180-201ENSMUST00000158686 125 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC1.17□□□□□ -2.22
Cdh23Q99PF4 AC141884.1-201ENSMUST00000226327 636 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm25633-201ENSMUST00000178565 107 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Cdh23Q99PF4 Gm14355-201ENSMUST00000117352 264 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Gm45687-201ENSMUST00000209454 155 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Cdh23Q99PF4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Gm11785-201ENSMUST00000120165 601 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Gm23278-201ENSMUST00000157911 143 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.16□□□□□ -2.22
Cdh23Q99PF4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Cdh23Q99PF4 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.15□□□□□ -2.22
Cdh23Q99PF4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
Cdh23Q99PF4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.15□□□□□ -2.22
Cdh23Q99PF4 Gm8207-201ENSMUST00000171204 502 ntBASIC1.15□□□□□ -2.22
Cdh23Q99PF4 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.15□□□□□ -2.23
Cdh23Q99PF4 Gm15933-201ENSMUST00000117215 616 ntBASIC1.15□□□□□ -2.23
Cdh23Q99PF4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Cdh23Q99PF4 Gm13577-201ENSMUST00000121365 205 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm18598-201ENSMUST00000207724 597 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Mir211-201ENSMUST00000083651 106 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm24381-201ENSMUST00000122697 104 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm6486-201ENSMUST00000166202 434 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm37966-201ENSMUST00000193122 326 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm12393-201ENSMUST00000117084 848 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm15157-201ENSMUST00000121852 702 ntBASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Cdh23Q99PF4 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm45375-201ENSMUST00000210338 280 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm23517-201ENSMUST00000082830 192 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Mir27b-201ENSMUST00000083541 73 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm23321-201ENSMUST00000104465 126 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm22214-201ENSMUST00000157563 172 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.13□□□□□ -2.23
Cdh23Q99PF4 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.13□□□□□ -2.23
Cdh23Q99PF4 Gm22390-201ENSMUST00000157588 325 ntBASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Gm23813-201ENSMUST00000175153 77 ntBASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Cdh23Q99PF4 Gm14879-201ENSMUST00000117308 507 ntBASIC1.11□□□□□ -2.23
Cdh23Q99PF4 Gm25996-201ENSMUST00000175393 117 ntBASIC1.11□□□□□ -2.23
Cdh23Q99PF4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Cdh23Q99PF4 Mir6379-201ENSMUST00000183392 115 ntBASIC1.11□□□□□ -2.23
Cdh23Q99PF4 Gm29597-201ENSMUST00000188035 308 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms