Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm19908-201ENSMUST00000204684 391 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm44446-201ENSMUST00000204864 255 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm46194-201ENSMUST00000218136 320 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm24147-201ENSMUST00000082763 144 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RtcbQ99LF4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.07□□□□□ -1.6
RtcbQ99LF4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RtcbQ99LF4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm11432-201ENSMUST00000117334 231 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm23759-201ENSMUST00000158351 268 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm6374-201ENSMUST00000159051 788 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm25749-201ENSMUST00000175485 111 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm20630-201ENSMUST00000177387 551 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm20660-201ENSMUST00000177515 289 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm6651-201ENSMUST00000189471 271 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm42990-201ENSMUST00000199231 312 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm45327-201ENSMUST00000211612 565 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm25200-201ENSMUST00000083094 130 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm26497-201ENSMUST00000083146 107 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm8074-201ENSMUST00000095071 252 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RtcbQ99LF4 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.06□□□□□ -1.6
RtcbQ99LF4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm14652-201ENSMUST00000118479 235 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm12640-201ENSMUST00000120097 310 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm27926-201ENSMUST00000157180 66 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm23540-201ENSMUST00000157543 164 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm22389-201ENSMUST00000158193 301 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm20698-201ENSMUST00000175657 233 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm27608-201ENSMUST00000184822 162 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm45245-201ENSMUST00000210082 376 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 AC126440.1-201ENSMUST00000227098 349 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Gm42768-201ENSMUST00000197734 2897 ntBASIC5.05□□□□□ -1.6
RtcbQ99LF4 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RtcbQ99LF4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RtcbQ99LF4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm25765-201ENSMUST00000104100 132 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm15026-201ENSMUST00000119219 458 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm14940-201ENSMUST00000119309 495 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm13967-201ENSMUST00000120404 380 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm11982-201ENSMUST00000121480 314 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm11645-201ENSMUST00000121589 649 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm25333-201ENSMUST00000158035 246 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm25486-201ENSMUST00000158726 63 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RtcbQ99LF4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm17887-201ENSMUST00000200194 547 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.04□□□□□ -1.6
RtcbQ99LF4 Gm6240-201ENSMUST00000208014 473 ntBASIC5.04□□□□□ -1.6
RtcbQ99LF4 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms