Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm22968-201ENSMUST00000157955 118 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm24501-201ENSMUST00000158452 62 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm24085-201ENSMUST00000175172 116 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm18540-201ENSMUST00000204025 526 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm44208-201ENSMUST00000205199 421 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 AC166343.1-201ENSMUST00000213261 577 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Snord14e-201ENSMUST00000082857 90 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm23932-201ENSMUST00000082914 107 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm26329-201ENSMUST00000093723 110 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chmp7Q8R1T1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Chmp7Q8R1T1 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chmp7Q8R1T1 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.15□□□□□ -1.58
Chmp7Q8R1T1 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm15783-201ENSMUST00000117521 633 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm12647-201ENSMUST00000118977 265 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm6071-201ENSMUST00000119561 440 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm12956-201ENSMUST00000122184 414 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm26320-201ENSMUST00000157742 306 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm6374-201ENSMUST00000159051 788 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm26585-201ENSMUST00000180890 630 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Mir6372-201ENSMUST00000185114 109 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm19503-201ENSMUST00000187109 241 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm37239-201ENSMUST00000193510 141 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm37801-201ENSMUST00000194754 274 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm44385-201ENSMUST00000198781 81 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm6240-201ENSMUST00000208014 473 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Gm45162-201ENSMUST00000209013 618 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Chmp7Q8R1T1 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Mir701-201ENSMUST00000102208 109 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm25765-201ENSMUST00000104100 132 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm13273-201ENSMUST00000119737 159 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm11718-201ENSMUST00000119942 537 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm23759-201ENSMUST00000158351 268 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm25486-201ENSMUST00000158726 63 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm22114-201ENSMUST00000177756 107 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm28534-201ENSMUST00000187744 676 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm45879-201ENSMUST00000212521 392 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Chmp7Q8R1T1 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm24318-201ENSMUST00000104490 131 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm16242-201ENSMUST00000117741 334 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm12191-201ENSMUST00000118307 348 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm9703-201ENSMUST00000119573 343 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm6565-201ENSMUST00000121217 438 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm11982-201ENSMUST00000121480 314 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm23829-201ENSMUST00000157392 270 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm23901-201ENSMUST00000157570 107 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm25454-201ENSMUST00000157947 315 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm25436-201ENSMUST00000158275 145 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Mir6346-201ENSMUST00000183982 81 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm27997-201ENSMUST00000184942 69 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm34073-201ENSMUST00000195736 212 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm45403-201ENSMUST00000209453 276 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.13□□□□□ -1.59
Chmp7Q8R1T1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms