Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24552-201ENSMUST00000158646 103 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22693-201ENSMUST00000175049 442 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22776-201ENSMUST00000178634 94 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm23767-201ENSMUST00000179278 94 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm37557-201ENSMUST00000191640 139 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm37098-201ENSMUST00000192290 244 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.07□□□□□ -2.08
Ccdc28aQ8CEI3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25090-201ENSMUST00000104000 132 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm14894-201ENSMUST00000117170 270 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22554-201ENSMUST00000157798 147 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm23559-201ENSMUST00000157824 103 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22483-201ENSMUST00000157986 274 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26487-201ENSMUST00000158022 94 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm17161-201ENSMUST00000169187 524 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm37449-201ENSMUST00000193016 270 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm18658-201ENSMUST00000195558 270 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm43083-201ENSMUST00000199594 476 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm43284-201ENSMUST00000200103 253 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm23932-201ENSMUST00000082914 107 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25124-201ENSMUST00000083345 164 ntBASIC2.06□□□□□ -2.08
Ccdc28aQ8CEI3 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm12934-201ENSMUST00000119221 343 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm13581-201ENSMUST00000120675 278 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22755-201ENSMUST00000157143 100 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Mir6916-201ENSMUST00000184514 63 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm27979-201ENSMUST00000185126 56 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm29011-201ENSMUST00000191059 712 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm45772-201ENSMUST00000212961 240 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm3442-201ENSMUST00000216808 710 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Snord14d-201ENSMUST00000083424 86 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Mir30d-201ENSMUST00000083503 82 ntBASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc28aQ8CEI3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm13806-201ENSMUST00000117822 325 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26101-201ENSMUST00000157246 105 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22111-201ENSMUST00000178010 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm23687-201ENSMUST00000178664 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24566-201ENSMUST00000179286 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm23305-201ENSMUST00000179342 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm26389-201ENSMUST00000179819 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22130-201ENSMUST00000179979 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm22393-201ENSMUST00000180153 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm25085-201ENSMUST00000180298 79 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm29513-201ENSMUST00000185741 202 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.04□□□□□ -2.08
Ccdc28aQ8CEI3 Gm24044-201ENSMUST00000083107 156 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms