Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Atg4aQ8C9S8 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Atg4aQ8C9S8 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.4□□□□□ -1.86
Atg4aQ8C9S8 Gm25539-201ENSMUST00000116886 122 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm14428-201ENSMUST00000120408 822 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm6265-201ENSMUST00000149263 231 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm23167-201ENSMUST00000157155 103 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm24901-201ENSMUST00000158125 110 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm25490-201ENSMUST00000158734 130 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm16569-201ENSMUST00000160526 314 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Mir6341-201ENSMUST00000183490 121 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm27733-201ENSMUST00000184803 68 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm37119-201ENSMUST00000195691 389 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm43521-201ENSMUST00000197838 255 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm43107-201ENSMUST00000198729 255 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm19649-201ENSMUST00000201126 822 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm42850-201ENSMUST00000202094 201 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm44295-201ENSMUST00000203805 437 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm45588-201ENSMUST00000211213 630 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm19441-201ENSMUST00000221545 330 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm5955-201ENSMUST00000222712 219 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm25792-201ENSMUST00000083289 100 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 AF357428-201ENSMUST00000083815 69 ntBASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Atg4aQ8C9S8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Snord14c-201ENSMUST00000101927 86 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm23744-201ENSMUST00000104231 149 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm13406-201ENSMUST00000121991 256 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm22755-201ENSMUST00000157143 100 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm21754-201ENSMUST00000177550 479 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm27249-201ENSMUST00000185049 328 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm8392-201ENSMUST00000185647 835 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Npn2-202ENSMUST00000189275 235 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm28151-201ENSMUST00000189404 951 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm38332-201ENSMUST00000194189 147 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm42475-201ENSMUST00000201212 295 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm26458-201ENSMUST00000082832 128 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm24611-201ENSMUST00000083272 107 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Atg4aQ8C9S8 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm11420-201ENSMUST00000120047 402 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm4916-201ENSMUST00000126139 642 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm24879-201ENSMUST00000158386 143 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm23409-201ENSMUST00000158516 237 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm24736-201ENSMUST00000158862 130 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm37869-201ENSMUST00000193385 595 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm44076-201ENSMUST00000203072 520 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm44818-201ENSMUST00000206608 358 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Gm9762-201ENSMUST00000036976 444 ntBASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Atg4aQ8C9S8 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms