Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm28623-201ENSMUST00000187219 192 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm20811-201ENSMUST00000190500 553 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm45048-201ENSMUST00000207058 429 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm45687-201ENSMUST00000209454 155 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Mir423-201ENSMUST00000083584 109 ntBASIC2.48□□□□□ -2.01
Usp47Q8BY87 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Usp47Q8BY87 Gm25560-201ENSMUST00000104606 176 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm11898-201ENSMUST00000117161 385 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm26000-201ENSMUST00000157991 107 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Mir5136-201ENSMUST00000175573 76 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm18415-201ENSMUST00000177464 647 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm18855-201ENSMUST00000206689 570 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.47□□□□□ -2.01
Usp47Q8BY87 Gm7751-201ENSMUST00000212868 709 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.47□□□□□ -2.01
Usp47Q8BY87 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm24875-201ENSMUST00000158888 104 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm23267-201ENSMUST00000178490 132 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm29492-201ENSMUST00000187124 457 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm28744-201ENSMUST00000189939 340 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm44727-201ENSMUST00000204225 451 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm44865-201ENSMUST00000207240 531 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.46□□□□□ -2.02
Usp47Q8BY87 Gm24280-201ENSMUST00000104237 134 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm24889-201ENSMUST00000104388 132 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm14602-201ENSMUST00000118625 340 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm24060-201ENSMUST00000157494 95 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm8161-201ENSMUST00000168739 481 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.45□□□□□ -2.02
Usp47Q8BY87 Gm44274-201ENSMUST00000203417 256 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.45□□□□□ -2.02
Usp47Q8BY87 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Snord104-201ENSMUST00000083192 70 ntBASIC2.45□□□□□ -2.02
Usp47Q8BY87 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.44□□□□□ -2.02
Usp47Q8BY87 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Usp47Q8BY87 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm15125-201ENSMUST00000116185 800 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm12934-201ENSMUST00000119221 343 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm24002-201ENSMUST00000158456 104 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm42474-201ENSMUST00000201073 505 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm22353-201ENSMUST00000083918 136 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.44□□□□□ -2.02
Usp47Q8BY87 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm26080-201ENSMUST00000104069 131 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm24592-201ENSMUST00000122505 106 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm17204-201ENSMUST00000167936 478 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Adgrg4-206ENSMUST00000168724 531 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm24757-201ENSMUST00000176987 371 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm5900-201ENSMUST00000179862 375 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm25412-201ENSMUST00000180258 107 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm18433-201ENSMUST00000192747 197 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm18892-201ENSMUST00000217628 881 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Mir148b-201ENSMUST00000083626 97 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Snora33-201ENSMUST00000093556 129 ntBASIC2.43□□□□□ -2.02
Usp47Q8BY87 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Usp47Q8BY87 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Usp47Q8BY87 Gm7350-201ENSMUST00000120964 636 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm24840-201ENSMUST00000122603 147 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm22563-201ENSMUST00000157333 269 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm25051-201ENSMUST00000158602 249 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm23967-201ENSMUST00000175062 78 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm27999-201ENSMUST00000183539 193 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Npn2-202ENSMUST00000189275 235 ntBASIC2.42□□□□□ -2.02
Usp47Q8BY87 Gm6801-201ENSMUST00000190697 339 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms