Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm11845-201ENSMUST00000117886 327 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm6923-201ENSMUST00000118343 406 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm14119-201ENSMUST00000119511 235 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm11456-201ENSMUST00000121070 256 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm13356-201ENSMUST00000121678 335 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm14578-201ENSMUST00000122166 391 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm26348-201ENSMUST00000157528 240 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm24211-201ENSMUST00000158264 107 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm24681-201ENSMUST00000158760 107 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm25365-201ENSMUST00000158852 121 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm20542-201ENSMUST00000174582 372 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm24816-201ENSMUST00000175311 151 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm23152-201ENSMUST00000175322 116 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Mir7242-201ENSMUST00000183710 79 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm28594-201ENSMUST00000187022 661 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm28623-201ENSMUST00000187219 192 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm38261-201ENSMUST00000192608 316 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Trbv7-201ENSMUST00000193339 402 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm34091-201ENSMUST00000200875 604 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm45023-201ENSMUST00000207951 379 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm18160-201ENSMUST00000214279 827 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm2628-201ENSMUST00000218019 426 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Gm25586-201ENSMUST00000082499 112 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 AF357341-201ENSMUST00000083088 75 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.11□□□□□ -1.91
Tdp1Q8BJ37 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm11876-201ENSMUST00000120002 269 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm13511-201ENSMUST00000121167 363 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm8880-201ENSMUST00000121800 454 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm16218-201ENSMUST00000155424 388 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm23538-201ENSMUST00000157535 101 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm24438-201ENSMUST00000157893 115 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm20718-201ENSMUST00000176058 259 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm28927-201ENSMUST00000191528 272 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm43415-201ENSMUST00000201934 750 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm45173-201ENSMUST00000206819 305 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm45614-201ENSMUST00000209994 721 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm18703-201ENSMUST00000215318 333 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm3442-201ENSMUST00000216808 710 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Tdp1Q8BJ37 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm14293-201ENSMUST00000118528 577 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm25670-201ENSMUST00000178423 107 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm26239-201ENSMUST00000178842 107 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm24267-201ENSMUST00000179841 107 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Mir7068-201ENSMUST00000183439 74 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm27535-201ENSMUST00000183814 157 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Mir6382-201ENSMUST00000184055 110 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm18296-201ENSMUST00000192475 783 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm36984-201ENSMUST00000192770 235 ntBASIC3.09□□□□□ -1.91
Tdp1Q8BJ37 Gm43224-201ENSMUST00000201567 898 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms