Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm5646-201ENSMUST00000120568 714 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm12045-201ENSMUST00000122122 573 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm23137-201ENSMUST00000157559 107 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Mir5099-201ENSMUST00000175257 74 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm29263-201ENSMUST00000188718 463 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm28384-201ENSMUST00000189079 463 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm28314-201ENSMUST00000191276 345 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm37037-201ENSMUST00000194475 424 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm7871-201ENSMUST00000195346 618 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm44295-201ENSMUST00000203805 437 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm2544-201ENSMUST00000222702 756 ntBASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Ccdc40Q8BI79 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm24403-201ENSMUST00000104616 130 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm13343-201ENSMUST00000116474 105 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm15760-201ENSMUST00000119553 283 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm15177-201ENSMUST00000120491 577 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm22452-201ENSMUST00000122804 104 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Snord93-201ENSMUST00000175580 71 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm18403-201ENSMUST00000192907 529 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm35570-201ENSMUST00000198730 681 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm44903-201ENSMUST00000206840 130 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm23096-201ENSMUST00000083447 107 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.88□□□□□ -1.95
Ccdc40Q8BI79 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm23911-201ENSMUST00000104596 134 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm12814-201ENSMUST00000117091 846 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm8217-201ENSMUST00000119136 465 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm12825-201ENSMUST00000120249 563 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm12042-201ENSMUST00000120479 301 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm16412-201ENSMUST00000121602 273 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm15466-201ENSMUST00000122299 333 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm23538-201ENSMUST00000157535 101 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm26186-201ENSMUST00000157689 125 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm3470-201ENSMUST00000160819 420 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm10177-202ENSMUST00000161698 207 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm28637-201ENSMUST00000179424 345 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm21489-201ENSMUST00000189668 818 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm19326-201ENSMUST00000219818 326 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Gm23249-201ENSMUST00000083369 161 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Mir465-201ENSMUST00000093563 74 ntBASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc40Q8BI79 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm25466-201ENSMUST00000103995 132 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm14579-201ENSMUST00000117068 283 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm14794-201ENSMUST00000118181 192 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm11285-201ENSMUST00000118443 322 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm12156-201ENSMUST00000119188 554 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm15112-201ENSMUST00000120152 860 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm24138-201ENSMUST00000157572 114 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm22330-201ENSMUST00000158068 115 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm25557-201ENSMUST00000158084 315 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm22765-201ENSMUST00000158371 128 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm38044-201ENSMUST00000192964 487 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm37104-201ENSMUST00000193278 196 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm18748-201ENSMUST00000198507 622 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm42665-201ENSMUST00000202100 586 ntBASIC2.86□□□□□ -1.95
Ccdc40Q8BI79 Gm44125-201ENSMUST00000203068 448 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms