Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm14073-201ENSMUST00000117344 381 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm14751-201ENSMUST00000117693 222 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm14898-201ENSMUST00000120202 645 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm26348-201ENSMUST00000157528 240 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm24691-201ENSMUST00000157762 140 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Mir3066-201ENSMUST00000175296 83 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm20776-201ENSMUST00000189940 700 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm29516-201ENSMUST00000190402 468 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm38311-201ENSMUST00000192945 165 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm31520-201ENSMUST00000203048 733 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm45173-201ENSMUST00000206819 305 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm25796-201ENSMUST00000082645 163 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Mir208a-201ENSMUST00000083498 83 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm10343-201ENSMUST00000096279 348 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Clrn3Q8BHH8 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Mir466k-201ENSMUST00000116774 122 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm11943-201ENSMUST00000119473 327 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm14867-201ENSMUST00000120156 866 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm23600-201ENSMUST00000157260 71 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm25066-201ENSMUST00000158145 123 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm24771-201ENSMUST00000158508 137 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm23860-201ENSMUST00000179446 132 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm29641-201ENSMUST00000188955 259 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm38149-201ENSMUST00000191943 339 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Clrn3Q8BHH8 Gm2003-201ENSMUST00000118537 636 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm25270-201ENSMUST00000122606 138 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm14333-201ENSMUST00000130484 264 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm25637-201ENSMUST00000157529 107 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm17061-201ENSMUST00000163167 499 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm17038-201ENSMUST00000166586 494 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm17064-201ENSMUST00000167690 452 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm17162-201ENSMUST00000168538 473 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm22131-201ENSMUST00000178415 94 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm19649-201ENSMUST00000201126 822 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm43600-201ENSMUST00000202134 223 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm18252-203ENSMUST00000215855 757 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm7753-201ENSMUST00000221007 867 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Clrn3Q8BHH8 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm26504-201ENSMUST00000102033 94 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm24670-201ENSMUST00000104154 132 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm14931-201ENSMUST00000111079 253 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm12386-201ENSMUST00000117380 688 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm15103-201ENSMUST00000119893 871 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm14599-201ENSMUST00000120469 474 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm15223-201ENSMUST00000120989 826 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm24212-201ENSMUST00000158258 132 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm3025-201ENSMUST00000163454 489 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm6788-201ENSMUST00000166459 270 ntBASIC2.29□□□□□ -2.04
Clrn3Q8BHH8 Gm2878-201ENSMUST00000170173 486 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms