Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm27493-201ENSMUST00000184128 78 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm27245-201ENSMUST00000184385 376 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm36638-201ENSMUST00000193295 400 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm43991-201ENSMUST00000203751 274 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm10794-201ENSMUST00000099624 207 ntBASIC2.17□□□□□ -2.06
Topbp1Q6ZQF0 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm12765-201ENSMUST00000117273 615 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm649-201ENSMUST00000117284 1054 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2066-201ENSMUST00000118046 389 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2288-201ENSMUST00000118560 638 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm12351-201ENSMUST00000118727 292 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm11843-201ENSMUST00000118984 425 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2318-201ENSMUST00000119623 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2005-201ENSMUST00000120759 542 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7438-201ENSMUST00000177664 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7408-201ENSMUST00000178014 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7386-201ENSMUST00000178020 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm3657-201ENSMUST00000178170 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7415-201ENSMUST00000178205 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7398-201ENSMUST00000178589 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7391-201ENSMUST00000178680 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2092-201ENSMUST00000178887 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm7375-201ENSMUST00000179232 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm2759-201ENSMUST00000179938 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm3681-201ENSMUST00000179940 639 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm43224-201ENSMUST00000201567 898 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm45273-201ENSMUST00000211559 281 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Gm18892-201ENSMUST00000217628 881 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Mir344-201ENSMUST00000083634 95 ntBASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.16□□□□□ -2.06
Topbp1Q6ZQF0 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Gm20915-201ENSMUST00000191575 663 ntBASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Topbp1Q6ZQF0 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Gm14163-201ENSMUST00000117342 217 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Gm25341-201ENSMUST00000157461 268 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Mir1954-201ENSMUST00000175595 86 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Mir7063-201ENSMUST00000184158 91 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Gm24406-201ENSMUST00000083026 128 ntBASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Topbp1Q6ZQF0 Mir343-201ENSMUST00000102360 75 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm12934-201ENSMUST00000119221 343 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm16331-201ENSMUST00000144274 498 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm23558-201ENSMUST00000157823 80 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Samd15-201ENSMUST00000169669 1194 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm6801-201ENSMUST00000190697 339 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.13□□□□□ -2.07
Topbp1Q6ZQF0 Gm22494-201ENSMUST00000104495 128 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm23476-201ENSMUST00000158881 274 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm17062-201ENSMUST00000166987 461 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm24863-201ENSMUST00000179499 107 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm26126-201ENSMUST00000083188 164 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm22353-201ENSMUST00000083918 136 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm12706-201ENSMUST00000121588 698 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm24783-201ENSMUST00000157639 100 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Mir5136-201ENSMUST00000175573 76 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm27656-201ENSMUST00000185055 80 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm43723-201ENSMUST00000196886 189 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm3010-201ENSMUST00000198805 448 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.12□□□□□ -2.07
Topbp1Q6ZQF0 Gm15282-201ENSMUST00000117707 300 ntBASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Gm23329-201ENSMUST00000157415 108 ntBASIC2.11□□□□□ -2.07
Topbp1Q6ZQF0 Gm23122-201ENSMUST00000157645 103 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms