Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm26020-201ENSMUST00000122729 183 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm24727-201ENSMUST00000158231 144 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm22890-201ENSMUST00000158642 144 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm23775-201ENSMUST00000158991 249 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm25397-201ENSMUST00000176951 92 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm10105-201ENSMUST00000184601 270 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Mir6372-201ENSMUST00000185114 109 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm18956-201ENSMUST00000192857 480 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm32340-201ENSMUST00000192883 259 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm37889-201ENSMUST00000194174 251 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm42850-201ENSMUST00000202094 201 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm45031-201ENSMUST00000206800 288 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Snord35b-201ENSMUST00000082833 87 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Gm381-201ENSMUST00000117443 2037 ntBASIC4.11□□□□□ -1.75
Ddx55Q6ZPL9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm23747-201ENSMUST00000104228 131 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm14811-201ENSMUST00000117070 117 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm12255-201ENSMUST00000117184 284 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm2066-201ENSMUST00000118046 389 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm5762-201ENSMUST00000119204 258 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm22534-201ENSMUST00000158173 104 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm25243-201ENSMUST00000174912 207 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Mir7k-201ENSMUST00000184115 110 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm42621-201ENSMUST00000198114 275 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Mir7682-201ENSMUST00000198467 58 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm44718-201ENSMUST00000206886 359 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm46193-201ENSMUST00000219399 364 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm6361-201ENSMUST00000091031 435 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.1□□□□□ -1.75
Ddx55Q6ZPL9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm22472-201ENSMUST00000104115 134 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm23322-201ENSMUST00000104464 167 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm14823-201ENSMUST00000117698 238 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm12578-201ENSMUST00000121244 417 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm24635-201ENSMUST00000122712 128 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm25621-201ENSMUST00000157223 114 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm24138-201ENSMUST00000157572 114 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm23411-201ENSMUST00000157988 62 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm8532-201ENSMUST00000179174 461 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm27733-201ENSMUST00000184803 68 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm28339-201ENSMUST00000185845 696 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm29062-201ENSMUST00000186032 694 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm28598-201ENSMUST00000186490 615 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm28057-201ENSMUST00000186603 615 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm28896-201ENSMUST00000188609 696 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm29268-201ENSMUST00000188669 615 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm7858-201ENSMUST00000190177 622 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm28978-201ENSMUST00000191120 615 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm37172-201ENSMUST00000191926 615 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm38107-201ENSMUST00000194873 696 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm45101-201ENSMUST00000208327 232 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm35857-201ENSMUST00000212739 178 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm4987-201ENSMUST00000078326 408 ntBASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddx55Q6ZPL9 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.09□□□□□ -1.76
Ddx55Q6ZPL9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ddx55Q6ZPL9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm14622-201ENSMUST00000117117 468 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm12765-201ENSMUST00000117273 615 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm12025-201ENSMUST00000117768 144 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm13806-201ENSMUST00000117822 325 ntBASIC4.08□□□□□ -1.76
Ddx55Q6ZPL9 Gm11322-201ENSMUST00000118095 435 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms