Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm25859-201ENSMUST00000083710 91 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm25411-201ENSMUST00000083760 151 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Smarca1Q6PGB8 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm26020-201ENSMUST00000122729 183 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm22766-201ENSMUST00000158372 99 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Trbv24-201ENSMUST00000194614 347 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm37523-201ENSMUST00000194901 412 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm45101-201ENSMUST00000208327 232 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm18113-201ENSMUST00000220630 303 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 LOC667541-201ENSMUST00000223408 278 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm24268-201ENSMUST00000082990 110 ntBASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smarca1Q6PGB8 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm23747-201ENSMUST00000104228 131 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm15030-201ENSMUST00000119804 484 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm13717-201ENSMUST00000119868 365 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm23028-201ENSMUST00000158773 265 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm8207-201ENSMUST00000171204 502 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm23144-201ENSMUST00000180226 107 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm27520-201ENSMUST00000184872 81 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm7329-201ENSMUST00000185915 210 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm8242-202ENSMUST00000193056 475 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm44324-201ENSMUST00000198517 135 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm44030-201ENSMUST00000204865 432 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm7624-201ENSMUST00000209702 435 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm19441-201ENSMUST00000221545 330 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Smarca1Q6PGB8 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm24118-201ENSMUST00000103972 126 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm15936-201ENSMUST00000118706 460 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 AA413626-201ENSMUST00000121125 494 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm9225-201ENSMUST00000121921 836 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm6568-201ENSMUST00000122274 697 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm25559-201ENSMUST00000157182 74 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm24240-201ENSMUST00000157785 135 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm24532-201ENSMUST00000157951 286 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm26041-201ENSMUST00000158148 108 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm23068-201ENSMUST00000158239 293 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm22631-201ENSMUST00000179656 94 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm22633-201ENSMUST00000179834 107 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm8151-201ENSMUST00000184817 871 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm28002-201ENSMUST00000184832 100 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm7858-201ENSMUST00000190177 622 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm19032-201ENSMUST00000208584 592 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm45860-201ENSMUST00000212700 334 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm22970-201ENSMUST00000083304 186 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.62□□□□□ -1.83
Smarca1Q6PGB8 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm11849-201ENSMUST00000121293 261 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm15077-201ENSMUST00000122344 362 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Mir7k-201ENSMUST00000184115 110 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm29413-201ENSMUST00000186019 880 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm29104-201ENSMUST00000186304 222 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm29639-201ENSMUST00000188375 580 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm37085-201ENSMUST00000193780 196 ntBASIC3.61□□□□□ -1.83
Smarca1Q6PGB8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms