Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm26019-201ENSMUST00000104407 119 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm25315-201ENSMUST00000116823 121 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm14512-201ENSMUST00000117924 230 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm14940-201ENSMUST00000119309 495 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm16060-201ENSMUST00000153140 478 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm23956-201ENSMUST00000157211 119 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm23638-201ENSMUST00000175073 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm23158-201ENSMUST00000175076 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Mir5103-201ENSMUST00000175111 79 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm24086-201ENSMUST00000175171 98 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm22907-201ENSMUST00000175198 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm22625-201ENSMUST00000175382 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm22875-201ENSMUST00000175449 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm25197-201ENSMUST00000175516 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm27857-201ENSMUST00000176930 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm26268-201ENSMUST00000177685 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm25198-201ENSMUST00000178574 110 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm23681-201ENSMUST00000178821 126 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm26866-201ENSMUST00000180414 802 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm27940-201ENSMUST00000184449 98 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm28717-201ENSMUST00000189950 315 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm7837-201ENSMUST00000190873 412 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm42925-201ENSMUST00000197359 285 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Mir6994-201ENSMUST00000198985 73 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm19252-201ENSMUST00000204705 305 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm45499-201ENSMUST00000211656 280 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm7422-201ENSMUST00000220115 640 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm26164-201ENSMUST00000083793 104 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Gm23851-201ENSMUST00000083831 103 ntBASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Rnf220Q6PDX6 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm23608-201ENSMUST00000104545 128 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm23879-201ENSMUST00000116874 126 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm7123-201ENSMUST00000117647 213 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm15244-201ENSMUST00000121122 130 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm25107-201ENSMUST00000122472 129 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm25278-201ENSMUST00000157267 120 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm24113-201ENSMUST00000157477 276 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm22216-201ENSMUST00000157557 114 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm26310-201ENSMUST00000157766 117 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm24959-201ENSMUST00000157924 146 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Scarna6-201ENSMUST00000158656 265 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm16232-201ENSMUST00000162856 167 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm17062-201ENSMUST00000166987 461 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Mir3090-201ENSMUST00000175597 87 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Mir7006-201ENSMUST00000183624 69 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm44520-201ENSMUST00000205447 802 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm18453-201ENSMUST00000208000 626 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC134537.2-201ENSMUST00000217770 575 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm22247-201ENSMUST00000082476 131 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Snora70-201ENSMUST00000083047 137 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.81□□□□□ -1.8
Rnf220Q6PDX6 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm24117-201ENSMUST00000103973 133 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm13903-201ENSMUST00000120945 193 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm15168-201ENSMUST00000121057 316 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm14768-201ENSMUST00000122126 678 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm8200-201ENSMUST00000122390 222 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm26275-201ENSMUST00000157101 268 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm22101-201ENSMUST00000157928 103 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm44161-201ENSMUST00000203532 253 ntBASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.8□□□□□ -1.8
Rnf220Q6PDX6 Gm18850-201ENSMUST00000211578 388 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms