Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.66□□□□□ -1.82
CtcfQ61164 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CtcfQ61164 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CtcfQ61164 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CtcfQ61164 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CtcfQ61164 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CtcfQ61164 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CtcfQ61164 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm12837-201ENSMUST00000120131 373 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm2020-201ENSMUST00000145242 579 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm23592-201ENSMUST00000157859 117 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm22434-201ENSMUST00000158549 122 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm26468-201ENSMUST00000158644 106 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.65□□□□□ -1.83
CtcfQ61164 Gm24819-201ENSMUST00000175094 166 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CtcfQ61164 Gm21171-201ENSMUST00000180048 673 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm28146-201ENSMUST00000185517 701 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.65□□□□□ -1.83
CtcfQ61164 Gm8242-202ENSMUST00000193056 475 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm9379-201ENSMUST00000196790 646 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm44149-201ENSMUST00000204256 226 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.65□□□□□ -1.83
CtcfQ61164 Gm44818-201ENSMUST00000206608 358 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm44513-201ENSMUST00000206811 439 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm2676-201ENSMUST00000207279 606 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.65□□□□□ -1.83
CtcfQ61164 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CtcfQ61164 Gm8231-201ENSMUST00000221617 783 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm23345-201ENSMUST00000083817 150 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.65□□□□□ -1.83
CtcfQ61164 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CtcfQ61164 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CtcfQ61164 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.64□□□□□ -1.83
CtcfQ61164 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Gm25088-201ENSMUST00000101803 79 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm24376-201ENSMUST00000104399 127 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm14292-201ENSMUST00000118761 456 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm24936-201ENSMUST00000122598 247 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm25970-201ENSMUST00000157165 86 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm22059-201ENSMUST00000157544 104 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm23755-201ENSMUST00000157578 343 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm23775-201ENSMUST00000158991 249 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm9071-201ENSMUST00000165915 474 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm23415-201ENSMUST00000175519 83 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Gm28141-201ENSMUST00000186676 342 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm29064-201ENSMUST00000187014 813 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm37523-201ENSMUST00000194901 412 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.64□□□□□ -1.83
CtcfQ61164 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm44927-201ENSMUST00000207573 716 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm6842-201ENSMUST00000211361 390 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm19219-201ENSMUST00000215863 724 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CtcfQ61164 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.64□□□□□ -1.83
CtcfQ61164 Gm7753-201ENSMUST00000221007 867 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm26206-201ENSMUST00000082908 110 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CtcfQ61164 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.64□□□□□ -1.83
CtcfQ61164 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CtcfQ61164 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CtcfQ61164 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CtcfQ61164 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CtcfQ61164 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CtcfQ61164 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22590-201ENSMUST00000104247 128 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm25727-201ENSMUST00000104522 131 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm13046-201ENSMUST00000117391 501 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm14815-201ENSMUST00000120060 488 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm12095-201ENSMUST00000121962 816 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22320-201ENSMUST00000157149 312 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm27592-201ENSMUST00000157729 126 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm25902-201ENSMUST00000158493 318 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22174-201ENSMUST00000175050 125 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22692-201ENSMUST00000175055 125 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm27634-201ENSMUST00000175060 126 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22460-201ENSMUST00000175269 124 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm25535-201ENSMUST00000175364 125 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm24365-201ENSMUST00000175384 125 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm44310-201ENSMUST00000175424 126 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 Gm22639-201ENSMUST00000175591 125 ntBASIC3.63□□□□□ -1.83
CtcfQ61164 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CtcfQ61164 Gm24979-201ENSMUST00000178626 126 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms