Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm15177-201ENSMUST00000120491 577 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm24937-201ENSMUST00000122597 134 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm22099-201ENSMUST00000157925 123 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm23895-201ENSMUST00000158108 160 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm22765-201ENSMUST00000158371 128 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm20698-201ENSMUST00000175657 233 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm25194-201ENSMUST00000177987 79 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm27698-201ENSMUST00000184060 249 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm28802-201ENSMUST00000188624 944 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usf1Q61069 Gm24707-201ENSMUST00000082812 107 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm25582-201ENSMUST00000083412 110 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Gm23516-201ENSMUST00000093728 107 ntBASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usf1Q61069 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.49□□□□□ -2.01
Usf1Q61069 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Usf1Q61069 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Usf1Q61069 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm14815-201ENSMUST00000120060 488 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm25807-201ENSMUST00000122783 305 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm12238-201ENSMUST00000127764 124 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm2020-201ENSMUST00000145242 579 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm23538-201ENSMUST00000157535 101 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm22651-201ENSMUST00000157872 94 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm24532-201ENSMUST00000157951 286 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm17085-201ENSMUST00000165425 502 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm22858-201ENSMUST00000174972 76 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Snord93-201ENSMUST00000175580 71 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm24925-201ENSMUST00000178157 107 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm26189-201ENSMUST00000179879 107 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm28666-201ENSMUST00000186649 274 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm43384-201ENSMUST00000200569 637 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm2676-201ENSMUST00000207279 606 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.49□□□□□ -2.01
Usf1Q61069 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.49□□□□□ -2.01
Usf1Q61069 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.49□□□□□ -2.01
Usf1Q61069 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usf1Q61069 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Usf1Q61069 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usf1Q61069 Gm26377-201ENSMUST00000102184 108 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm14932-201ENSMUST00000117112 453 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm11813-201ENSMUST00000118586 291 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm5937-201ENSMUST00000119715 643 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm12213-201ENSMUST00000119924 353 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm6587-201ENSMUST00000120219 613 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm16354-201ENSMUST00000155376 150 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm26195-201ENSMUST00000175035 101 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm27527-201ENSMUST00000183903 99 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Mir7009-201ENSMUST00000184519 64 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm27959-201ENSMUST00000185172 111 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm28534-201ENSMUST00000187744 676 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.48□□□□□ -2.01
Usf1Q61069 Gm37616-201ENSMUST00000193974 322 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.48□□□□□ -2.01
Usf1Q61069 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.48□□□□□ -2.01
Usf1Q61069 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.48□□□□□ -2.01
Usf1Q61069 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usf1Q61069 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usf1Q61069 Gm26055-201ENSMUST00000083038 107 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.48□□□□□ -2.01
Usf1Q61069 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usf1Q61069 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Usf1Q61069 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Usf1Q61069 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usf1Q61069 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Usf1Q61069 Gm14594-201ENSMUST00000118052 537 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Gm14590-201ENSMUST00000118934 537 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Gm9440-201ENSMUST00000119667 539 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Gm15112-201ENSMUST00000120152 860 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Gm14694-201ENSMUST00000121856 282 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Gm23111-201ENSMUST00000122652 105 ntBASIC2.47□□□□□ -2.01
Usf1Q61069 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms