Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22493-201ENSMUST00000104494 132 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm16428-201ENSMUST00000121193 723 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm23137-201ENSMUST00000157559 107 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm22600-201ENSMUST00000157598 269 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm24237-201ENSMUST00000157790 132 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm22535-201ENSMUST00000158174 119 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm25528-201ENSMUST00000180264 132 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Mir7006-201ENSMUST00000183624 69 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm27379-201ENSMUST00000183730 123 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm27248-201ENSMUST00000184004 166 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm28591-201ENSMUST00000185259 183 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm7329-201ENSMUST00000185915 210 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm42828-201ENSMUST00000199669 469 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 AC153924.1-201ENSMUST00000220117 312 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm22293-201ENSMUST00000083314 109 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Mir325-201ENSMUST00000083491 98 ntBASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trav3-1Q5R1I8 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm15799-201ENSMUST00000120899 289 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm11882-201ENSMUST00000121463 506 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm14101-201ENSMUST00000121502 473 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm23172-201ENSMUST00000157160 124 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm25342-201ENSMUST00000157459 122 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm24534-201ENSMUST00000157949 291 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm24086-201ENSMUST00000175171 98 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Mir7653-201ENSMUST00000184358 61 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm27991-201ENSMUST00000184804 137 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm28788-201ENSMUST00000189717 375 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm29558-201ENSMUST00000190134 375 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm18704-201ENSMUST00000219736 446 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm23846-201ENSMUST00000083835 107 ntBASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav3-1Q5R1I8 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm22657-201ENSMUST00000104197 132 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm14835-201ENSMUST00000119039 315 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm14815-201ENSMUST00000120060 488 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm12926-201ENSMUST00000121158 409 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm22478-201ENSMUST00000122570 154 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm22322-201ENSMUST00000157151 111 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm25624-201ENSMUST00000157222 275 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm25667-201ENSMUST00000157701 275 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Mir3062-201ENSMUST00000174986 105 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm25994-201ENSMUST00000175392 101 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm37676-201ENSMUST00000195496 507 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Mir7021-201ENSMUST00000197026 63 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm7786-201ENSMUST00000210494 436 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 AC150314.1-201ENSMUST00000214798 238 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm26126-201ENSMUST00000083188 164 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Gm25792-201ENSMUST00000083289 100 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.16□□□□□ -2.22
Trav3-1Q5R1I8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm12646-201ENSMUST00000119144 238 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm14881-201ENSMUST00000120366 372 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm14129-201ENSMUST00000122436 291 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm24895-201ENSMUST00000122742 74 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm9071-201ENSMUST00000165915 474 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20794-201ENSMUST00000177626 628 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm28637-201ENSMUST00000179424 345 ntBASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav3-1Q5R1I8 Mir6401-201ENSMUST00000184499 109 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms