Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir1192-201ENSMUST00000116976 121 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12640-201ENSMUST00000120097 310 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12956-201ENSMUST00000122184 414 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm26101-201ENSMUST00000157246 105 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm23324-201ENSMUST00000157421 131 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22483-201ENSMUST00000157986 274 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24417-201ENSMUST00000178123 79 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24653-201ENSMUST00000178541 79 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm25934-201ENSMUST00000178642 79 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm7329-201ENSMUST00000185915 210 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm17929-201ENSMUST00000186851 627 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm38075-201ENSMUST00000191979 920 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm37098-201ENSMUST00000192290 244 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm37533-201ENSMUST00000193848 545 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm43550-201ENSMUST00000200597 303 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm45772-201ENSMUST00000212961 240 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm15113-201ENSMUST00000119280 836 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm9225-201ENSMUST00000121921 836 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24010-201ENSMUST00000157731 282 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Mir6338-201ENSMUST00000183389 109 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Mir6372-201ENSMUST00000185114 109 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm43043-201ENSMUST00000196579 412 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm6059-201ENSMUST00000196903 340 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm44477-201ENSMUST00000199661 110 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Mir7217-201ENSMUST00000200304 62 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.79□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm22151-201ENSMUST00000116963 58 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12878-201ENSMUST00000118744 332 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm11471-201ENSMUST00000121824 198 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm14363-201ENSMUST00000122304 409 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm12591-201ENSMUST00000122407 1177 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm16354-201ENSMUST00000155376 150 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24237-201ENSMUST00000157790 132 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm24857-201ENSMUST00000158061 310 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm20698-201ENSMUST00000175657 233 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm17937-201ENSMUST00000197908 742 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm43587-201ENSMUST00000199590 204 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm45013-201ENSMUST00000206883 178 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 CT030182.3-201ENSMUST00000225986 582 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Gm23247-201ENSMUST00000083373 107 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Mir208a-201ENSMUST00000083498 83 ntBASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav5d-4Q5R1F6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm13731-201ENSMUST00000117332 196 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm23704-201ENSMUST00000158844 340 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm7837-201ENSMUST00000190873 412 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Trbv18-201ENSMUST00000194256 294 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm44300-201ENSMUST00000196792 121 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm19147-201ENSMUST00000199622 652 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm45614-201ENSMUST00000209994 721 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm23939-201ENSMUST00000082880 133 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.77□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav5d-4Q5R1F6 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.76□□□□□ -2.13
Trav5d-4Q5R1F6 Gm26504-201ENSMUST00000102033 94 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms