Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm24005-201ENSMUST00000158459 296 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Gm16162-201ENSMUST00000162296 297 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Gm25020-201ENSMUST00000178071 107 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Gm9402-201ENSMUST00000196849 388 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Gm45499-201ENSMUST00000211656 280 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 AC168880.2-201ENSMUST00000224488 201 ntBASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Trim41Q5NCC3 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm15624-203ENSMUST00000204811 3402 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm44530-201ENSMUST00000207920 3559 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm12550-201ENSMUST00000118478 329 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm37659-201ENSMUST00000194574 111 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Snord80-202ENSMUST00000199023 77 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm7065-201ENSMUST00000222150 474 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 AC124581.4-201ENSMUST00000225874 463 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 AC115735.2-201ENSMUST00000227135 351 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm10351-201ENSMUST00000087694 125 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 AC154329.1-201ENSMUST00000224408 3129 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm43654-201ENSMUST00000200664 3417 ntBASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim41Q5NCC3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim41Q5NCC3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC8□□□□□ -1.13
Trim41Q5NCC3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm22115-201ENSMUST00000103976 133 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm23923-201ENSMUST00000104108 133 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm25833-201ENSMUST00000104137 133 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm14303-201ENSMUST00000121320 171 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm25977-201ENSMUST00000158697 85 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29320-201ENSMUST00000185235 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29179-202ENSMUST00000186138 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm28598-201ENSMUST00000186490 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29448-201ENSMUST00000186675 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29314-201ENSMUST00000186800 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm28253-202ENSMUST00000187971 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29268-201ENSMUST00000188669 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm29169-201ENSMUST00000189835 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm37172-201ENSMUST00000191926 615 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm37617-201ENSMUST00000194309 159 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Gm8069-201ENSMUST00000197887 154 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 AC158807.1-201ENSMUST00000217959 187 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Mir383-201ENSMUST00000083523 70 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC8□□□□□ -1.13
Trim41Q5NCC3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 AC115910.1-201ENSMUST00000221188 4275 ntBASIC8□□□□□ -1.13
Trim41Q5NCC3 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim41Q5NCC3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Gm13504-201ENSMUST00000117490 316 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Gm24481-201ENSMUST00000157210 102 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Gm17187-201ENSMUST00000164622 410 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 AC153526.4-201ENSMUST00000217713 379 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 AC239878.1-201ENSMUST00000224212 506 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 AC098718.2-201ENSMUST00000226822 285 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 n-R5s3-201ENSMUST00000083879 112 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 AC133076.2-201ENSMUST00000227678 3532 ntBASIC7.99□□□□□ -1.13
Trim41Q5NCC3 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm37488-201ENSMUST00000195434 3374 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm22767-201ENSMUST00000158365 165 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm25535-201ENSMUST00000175364 125 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Mir7081-201ENSMUST00000184490 75 ntBASIC7.98□□□□□ -1.13
Trim41Q5NCC3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms