Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Ccdc88bQ4QRL3 Gm26049-201ENSMUST00000157313 108 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7094-201ENSMUST00000178379 366 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm37708-201ENSMUST00000192337 895 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm45049-201ENSMUST00000207586 591 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm23083-201ENSMUST00000157851 116 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm16490-201ENSMUST00000165299 351 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm37281-201ENSMUST00000192412 439 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm23096-201ENSMUST00000083447 107 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.33□□□□□ -2.04
Ccdc88bQ4QRL3 Gm14163-201ENSMUST00000117342 217 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm2066-201ENSMUST00000118046 389 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm2288-201ENSMUST00000118560 638 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm2318-201ENSMUST00000119623 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm22563-201ENSMUST00000157333 269 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7438-201ENSMUST00000177664 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7408-201ENSMUST00000178014 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7386-201ENSMUST00000178020 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm3657-201ENSMUST00000178170 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7415-201ENSMUST00000178205 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7398-201ENSMUST00000178589 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7391-201ENSMUST00000178680 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm2092-201ENSMUST00000178887 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7375-201ENSMUST00000179232 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm2759-201ENSMUST00000179938 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm3681-201ENSMUST00000179940 639 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Gm43489-201ENSMUST00000196810 993 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Ccdc88bQ4QRL3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.31□□□□□ -2.04
Ccdc88bQ4QRL3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.31□□□□□ -2.04
Ccdc88bQ4QRL3 Gm22794-201ENSMUST00000157228 306 ntBASIC2.31□□□□□ -2.04
Ccdc88bQ4QRL3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc88bQ4QRL3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.31□□□□□ -2.04
Ccdc88bQ4QRL3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc88bQ4QRL3 Gm26029-201ENSMUST00000158659 132 ntBASIC2.3□□□□□ -2.04
Ccdc88bQ4QRL3 Gm20915-201ENSMUST00000191575 663 ntBASIC2.3□□□□□ -2.04
Ccdc88bQ4QRL3 Gm19563-201ENSMUST00000222031 270 ntBASIC2.3□□□□□ -2.04
Ccdc88bQ4QRL3 Gm14815-201ENSMUST00000120060 488 ntBASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Gm22386-201ENSMUST00000158192 129 ntBASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Gm27044-201ENSMUST00000183033 796 ntBASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc88bQ4QRL3 Gm23991-201ENSMUST00000117033 93 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm11248-201ENSMUST00000119568 201 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm22036-201ENSMUST00000157279 215 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm38281-201ENSMUST00000192301 315 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Mir7217-201ENSMUST00000200304 62 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm31532-201ENSMUST00000203555 767 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm7065-201ENSMUST00000222150 474 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Mir221-201ENSMUST00000083488 95 ntBASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc88bQ4QRL3 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm5646-201ENSMUST00000120568 714 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm22478-201ENSMUST00000122570 154 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm44288-201ENSMUST00000205061 2795 ntBASIC2.27□□□□□ -2.05
Ccdc88bQ4QRL3 Gm24715-201ENSMUST00000102377 95 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm11556-201ENSMUST00000120751 288 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm22521-201ENSMUST00000158272 134 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm18855-201ENSMUST00000206689 570 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Gm44718-201ENSMUST00000206886 359 ntBASIC2.26□□□□□ -2.05
Ccdc88bQ4QRL3 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms