Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Gm45382-201ENSMUST00000210607 151 ntBASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Upf3aQ3ULJ3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm23551-201ENSMUST00000116852 121 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm13082-201ENSMUST00000118877 561 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm15452-201ENSMUST00000119877 240 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm14848-201ENSMUST00000121850 467 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm17154-201ENSMUST00000165748 431 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm27399-201ENSMUST00000184250 78 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm37709-201ENSMUST00000195074 600 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Upf3aQ3ULJ3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm14358-201ENSMUST00000118458 403 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm14669-201ENSMUST00000118841 250 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm12607-201ENSMUST00000120724 493 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm16412-201ENSMUST00000121602 273 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm7209-201ENSMUST00000122339 333 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm14651-201ENSMUST00000147192 442 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm23032-201ENSMUST00000157995 107 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm22769-201ENSMUST00000158367 98 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm10177-202ENSMUST00000161698 207 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Mir6338-201ENSMUST00000183389 109 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Mir8090-201ENSMUST00000185078 136 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm44477-201ENSMUST00000199661 110 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.61□□□□□ -1.99
Upf3aQ3ULJ3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm26377-201ENSMUST00000102184 108 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm26341-201ENSMUST00000104561 134 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm12636-201ENSMUST00000117395 624 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm14020-201ENSMUST00000118165 662 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm11268-201ENSMUST00000118347 267 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm12042-201ENSMUST00000120479 301 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm22794-201ENSMUST00000157228 306 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm16232-201ENSMUST00000162856 167 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm37213-201ENSMUST00000193077 586 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Upf3aQ3ULJ3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm22658-201ENSMUST00000104196 155 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Mir467h-201ENSMUST00000116759 121 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm14932-201ENSMUST00000117112 453 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm15936-201ENSMUST00000118706 460 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm14843-201ENSMUST00000119596 212 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm14069-201ENSMUST00000120815 229 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm16533-201ENSMUST00000140035 228 ntBASIC2.59□□□□□ -1.99
Upf3aQ3ULJ3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms