Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf40Q3U319 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm13432-201ENSMUST00000118861 241 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm11631-201ENSMUST00000119220 156 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm12926-201ENSMUST00000121158 409 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm24371-201ENSMUST00000122662 267 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm16557-201ENSMUST00000159182 191 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm17366-201ENSMUST00000167629 187 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm27512-201ENSMUST00000175328 126 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm27855-201ENSMUST00000184122 128 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm43602-201ENSMUST00000196772 300 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm24611-201ENSMUST00000083272 107 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Gm23042-201ENSMUST00000083866 101 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.25□□□□□ -1.57
Rnf40Q3U319 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rnf40Q3U319 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm23739-201ENSMUST00000102295 108 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm26067-201ENSMUST00000103789 110 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm24282-201ENSMUST00000104232 66 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm25917-201ENSMUST00000104267 130 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm13801-201ENSMUST00000120750 160 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm5396-201ENSMUST00000121222 532 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm24141-201ENSMUST00000122776 115 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm24395-201ENSMUST00000158139 125 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm24636-201ENSMUST00000158673 288 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm5777-201ENSMUST00000177265 448 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm24303-201ENSMUST00000178237 126 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm45492-201ENSMUST00000211611 288 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm8274-201ENSMUST00000219820 463 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm25515-201ENSMUST00000083858 157 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.24□□□□□ -1.57
Rnf40Q3U319 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rnf40Q3U319 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rnf40Q3U319 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm13343-201ENSMUST00000116474 105 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm25220-201ENSMUST00000157546 95 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm24010-201ENSMUST00000157731 282 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm24690-201ENSMUST00000157759 97 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm22967-201ENSMUST00000157956 239 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm16546-201ENSMUST00000159442 355 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Mir6971-201ENSMUST00000183497 63 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm27528-201ENSMUST00000183544 205 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Trbv6-201ENSMUST00000193743 276 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm43392-201ENSMUST00000196560 434 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 Gm44932-201ENSMUST00000206799 121 ntBASIC5.23□□□□□ -1.57
Rnf40Q3U319 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.23□□□□□ -1.57
Rnf40Q3U319 AC100209.2-201ENSMUST00000224461 451 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms