Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ssrp1Q08943 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm14897-201ENSMUST00000118213 207 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm15120-201ENSMUST00000120602 301 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm10067-201ENSMUST00000179462 348 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Mir6345-201ENSMUST00000184286 128 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm9722-201ENSMUST00000194568 802 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Mir5121-201ENSMUST00000198528 74 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm43393-201ENSMUST00000200147 194 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm45380-201ENSMUST00000210465 315 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gm10237-201ENSMUST00000078393 273 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ssrp1Q08943 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.25□□□□□ -1.73
Ssrp1Q08943 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ssrp1Q08943 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ssrp1Q08943 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm24281-201ENSMUST00000104234 136 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm13343-201ENSMUST00000116474 105 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm11456-201ENSMUST00000121070 256 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm22988-201ENSMUST00000122759 144 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm6058-201ENSMUST00000154261 399 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Mir1251-201ENSMUST00000175486 84 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm20698-201ENSMUST00000175657 233 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Mir6335-201ENSMUST00000184081 98 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.24□□□□□ -1.73
Ssrp1Q08943 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm45031-201ENSMUST00000206800 288 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 AL929417.1-201ENSMUST00000214901 124 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm25801-201ENSMUST00000082638 106 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Snord14e-201ENSMUST00000082857 90 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.24□□□□□ -1.73
Ssrp1Q08943 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ssrp1Q08943 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm22936-201ENSMUST00000103955 126 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm11577-201ENSMUST00000118030 737 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm11923-201ENSMUST00000118135 508 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm14013-201ENSMUST00000119006 270 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm8840-201ENSMUST00000122454 386 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm26149-201ENSMUST00000157432 108 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm25436-201ENSMUST00000158275 145 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm24976-201ENSMUST00000158972 135 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm42647-201ENSMUST00000195939 459 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm44030-201ENSMUST00000204865 432 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ssrp1Q08943 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.23□□□□□ -1.73
Ssrp1Q08943 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ssrp1Q08943 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm14282-201ENSMUST00000119484 240 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm11904-201ENSMUST00000120562 248 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm24847-201ENSMUST00000158032 108 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm26171-201ENSMUST00000158422 131 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm23702-201ENSMUST00000158840 130 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm24666-201ENSMUST00000158937 167 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm8580-201ENSMUST00000160295 464 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm25999-201ENSMUST00000175398 133 ntBASIC4.22□□□□□ -1.73
Ssrp1Q08943 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.22□□□□□ -1.73
Ssrp1Q08943 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms