Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm22269-201ENSMUST00000104002 130 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm22590-201ENSMUST00000104247 128 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm23817-201ENSMUST00000158449 104 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Mir5098-201ENSMUST00000175320 82 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm4479-201ENSMUST00000178807 171 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm27477-201ENSMUST00000184649 143 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm18177-201ENSMUST00000188373 404 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm33866-201ENSMUST00000196911 289 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm26379-202ENSMUST00000200225 132 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm22456-201ENSMUST00000082578 125 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm26165-201ENSMUST00000083791 138 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Mir466-201ENSMUST00000093591 73 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col9a1Q05722 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.16□□□□□ -1.58
Col9a1Q05722 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col9a1Q05722 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.15□□□□□ -1.58
Col9a1Q05722 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col9a1Q05722 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col9a1Q05722 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col9a1Q05722 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col9a1Q05722 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Col9a1Q05722 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col9a1Q05722 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col9a1Q05722 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.15□□□□□ -1.58
Col9a1Q05722 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col9a1Q05722 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.15□□□□□ -1.58
Col9a1Q05722 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.15□□□□□ -1.58
Col9a1Q05722 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm12719-201ENSMUST00000118859 241 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm23789-201ENSMUST00000122536 301 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm27773-201ENSMUST00000184087 78 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Mir6993-201ENSMUST00000184912 65 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC5.15□□□□□ -1.59
Col9a1Q05722 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm25409-201ENSMUST00000083764 131 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm24030-201ENSMUST00000083931 164 ntBASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.15□□□□□ -1.59
Col9a1Q05722 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col9a1Q05722 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col9a1Q05722 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm24376-201ENSMUST00000104399 127 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm15400-201ENSMUST00000118944 601 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm12458-201ENSMUST00000119387 495 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm14687-201ENSMUST00000120206 363 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm19503-201ENSMUST00000187109 241 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm28314-201ENSMUST00000191276 345 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Igkv1-115-201ENSMUST00000198714 302 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm45422-201ENSMUST00000211476 246 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm5010-201ENSMUST00000213131 260 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm4036-201ENSMUST00000220842 626 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm24166-201ENSMUST00000082724 135 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm23453-201ENSMUST00000083326 106 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Mir132-201ENSMUST00000083603 66 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms