Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm29452-201ENSMUST00000187996 313 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm28314-201ENSMUST00000191276 345 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm34073-201ENSMUST00000195736 212 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm44032-201ENSMUST00000204841 166 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm5899-201ENSMUST00000071770 270 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Mir504-201ENSMUST00000093602 79 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm37733-201ENSMUST00000195478 2962 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Col8a1Q00780 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Col8a1Q00780 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col8a1Q00780 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Mir667-201ENSMUST00000102441 92 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm24630-201ENSMUST00000122768 106 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm23168-201ENSMUST00000157156 143 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm23557-201ENSMUST00000157820 138 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Mir6393-201ENSMUST00000183709 94 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm27695-201ENSMUST00000184301 91 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm29428-201ENSMUST00000190086 409 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm28389-201ENSMUST00000190090 697 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm37732-201ENSMUST00000194377 316 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm44054-201ENSMUST00000203814 372 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm45403-201ENSMUST00000209453 276 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm29884-201ENSMUST00000218403 453 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col8a1Q00780 Snora7a-201ENSMUST00000082629 140 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm22704-201ENSMUST00000083027 137 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Svet1-201ENSMUST00000209370 3940 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.71□□□□□ -1.82
Col8a1Q00780 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col8a1Q00780 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col8a1Q00780 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col8a1Q00780 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col8a1Q00780 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col8a1Q00780 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm7853-201ENSMUST00000100708 478 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col8a1Q00780 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm25875-201ENSMUST00000104323 107 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm26018-201ENSMUST00000104406 128 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm24987-201ENSMUST00000104453 134 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm14861-201ENSMUST00000119451 455 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm14846-201ENSMUST00000121868 216 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm10444-201ENSMUST00000126708 148 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm25977-201ENSMUST00000158697 85 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm24348-201ENSMUST00000158710 130 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm24876-201ENSMUST00000158780 92 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Mir1251-201ENSMUST00000175486 84 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col8a1Q00780 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm44473-201ENSMUST00000204039 152 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm44817-201ENSMUST00000205416 453 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Gm25081-201ENSMUST00000082534 108 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.7□□□□□ -1.82
Col8a1Q00780 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col8a1Q00780 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.69□□□□□ -1.82
Col8a1Q00780 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col8a1Q00780 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms