Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm24292-201ENSMUST00000082888 107 ntBASIC3.35□□□□□ -1.87
CiitaP79621 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.35□□□□□ -1.87
CiitaP79621 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CiitaP79621 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CiitaP79621 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CiitaP79621 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.35□□□□□ -1.87
CiitaP79621 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CiitaP79621 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CiitaP79621 Gm15936-201ENSMUST00000118706 460 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm14793-201ENSMUST00000118739 311 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm9119-201ENSMUST00000118866 495 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm7071-201ENSMUST00000120458 462 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm12819-201ENSMUST00000122223 629 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm22452-201ENSMUST00000122804 104 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm24532-201ENSMUST00000157951 286 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CiitaP79621 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CiitaP79621 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.34□□□□□ -1.87
CiitaP79621 Gm43582-201ENSMUST00000196149 343 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm42475-201ENSMUST00000201212 295 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm44600-201ENSMUST00000208540 111 ntBASIC3.34□□□□□ -1.87
CiitaP79621 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Gm3442-201ENSMUST00000216808 710 ntBASIC3.34□□□□□ -1.87
CiitaP79621 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CiitaP79621 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CiitaP79621 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CiitaP79621 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CiitaP79621 Gm23615-201ENSMUST00000082602 65 ntBASIC3.34□□□□□ -1.87
CiitaP79621 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CiitaP79621 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
CiitaP79621 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CiitaP79621 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CiitaP79621 Gm13504-201ENSMUST00000117490 316 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm14918-201ENSMUST00000118153 268 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm4540-201ENSMUST00000170669 429 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm20698-201ENSMUST00000175657 233 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm24925-201ENSMUST00000178157 107 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm24713-201ENSMUST00000178850 107 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm25448-201ENSMUST00000180065 107 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.33□□□□□ -1.88
CiitaP79621 Gm28358-202ENSMUST00000189292 223 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm19089-201ENSMUST00000197207 613 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm7946-201ENSMUST00000203326 958 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Gm44041-201ENSMUST00000203678 396 ntBASIC3.33□□□□□ -1.88
CiitaP79621 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.33□□□□□ -1.88
CiitaP79621 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.33□□□□□ -1.88
CiitaP79621 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.33□□□□□ -1.88
CiitaP79621 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CiitaP79621 Gm22810-201ENSMUST00000082741 158 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CiitaP79621 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.33□□□□□ -1.88
CiitaP79621 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CiitaP79621 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.32□□□□□ -1.88
CiitaP79621 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
CiitaP79621 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.32□□□□□ -1.88
CiitaP79621 Gm15282-201ENSMUST00000117707 300 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Gm24787-201ENSMUST00000157380 123 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm16289-201ENSMUST00000162079 183 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm20651-201ENSMUST00000177219 329 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Mir6993-201ENSMUST00000184912 65 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Gm5116-201ENSMUST00000187732 463 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm29627-201ENSMUST00000187984 463 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CiitaP79621 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.32□□□□□ -1.88
CiitaP79621 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.32□□□□□ -1.88
CiitaP79621 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.32□□□□□ -1.88
CiitaP79621 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.32□□□□□ -1.88
CiitaP79621 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.32□□□□□ -1.88
CiitaP79621 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Mir184-201ENSMUST00000083662 69 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.32□□□□□ -1.88
CiitaP79621 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CiitaP79621 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CiitaP79621 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CiitaP79621 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.31□□□□□ -1.88
CiitaP79621 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CiitaP79621 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CiitaP79621 Gm13541-201ENSMUST00000119519 283 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Gm15266-201ENSMUST00000119635 255 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Gm11414-201ENSMUST00000121795 263 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Gm26027-201ENSMUST00000122725 268 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Gm23391-201ENSMUST00000157579 104 ntBASIC3.31□□□□□ -1.88
CiitaP79621 Gm23078-201ENSMUST00000157848 148 ntBASIC3.31□□□□□ -1.88
CiitaP79621 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.31□□□□□ -1.88
CiitaP79621 Gm37641-201ENSMUST00000193837 239 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms