Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Hmgb1P63158 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmgb1P63158 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb1P63158 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmgb1P63158 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm12954-201ENSMUST00000118610 611 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm23228-201ENSMUST00000157296 270 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm24739-201ENSMUST00000158855 292 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm24518-201ENSMUST00000180275 94 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm6947-201ENSMUST00000186254 78 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb1P63158 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm43193-201ENSMUST00000197732 441 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb1P63158 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb1P63158 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb1P63158 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm23454-201ENSMUST00000083332 133 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Gm26166-201ENSMUST00000083788 107 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Olfr575-201ENSMUST00000084812 957 ntBASIC4.01□□□□□ -1.77
Hmgb1P63158 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hmgb1P63158 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Hmgb1P63158 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb1P63158 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb1P63158 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hmgb1P63158 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hmgb1P63158 Snord66-201ENSMUST00000104051 75 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Hmgb1P63158 Gm11393-201ENSMUST00000118019 288 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm12513-201ENSMUST00000118617 352 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm15029-201ENSMUST00000119742 199 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm12578-201ENSMUST00000121244 417 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4□□□□□ -1.77
Hmgb1P63158 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4□□□□□ -1.77
Hmgb1P63158 Gm24393-201ENSMUST00000158135 97 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm22120-201ENSMUST00000175590 70 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm10292-201ENSMUST00000183142 581 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm20058-201ENSMUST00000186939 284 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm7449-201ENSMUST00000194393 663 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm29950-201ENSMUST00000195273 237 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm43487-201ENSMUST00000200331 1031 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm42739-201ENSMUST00000200687 226 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Gm43600-201ENSMUST00000202134 223 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4□□□□□ -1.77
Hmgb1P63158 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC4□□□□□ -1.77
Hmgb1P63158 AC153870.1-201ENSMUST00000219599 560 ntBASIC4□□□□□ -1.77
Hmgb1P63158 AC167192.1-201ENSMUST00000225908 139 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb1P63158 Gm43268-201ENSMUST00000201536 4055 ntBASIC4□□□□□ -1.77
Hmgb1P63158 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb1P63158 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb1P63158 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm15846-201ENSMUST00000116022 320 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm14073-201ENSMUST00000117344 381 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm13355-201ENSMUST00000117996 317 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm14293-201ENSMUST00000118528 577 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm24901-201ENSMUST00000158125 110 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm26401-201ENSMUST00000158502 76 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm25243-201ENSMUST00000174912 207 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm9022-202ENSMUST00000183285 483 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Mir7667-201ENSMUST00000183866 63 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm37455-201ENSMUST00000191993 529 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb1P63158 Snord14d-201ENSMUST00000083424 86 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb1P63158 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.99□□□□□ -1.77
Hmgb1P63158 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Hmgb1P63158 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm6584-201ENSMUST00000119671 447 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm12884-201ENSMUST00000120371 325 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm26256-201ENSMUST00000122499 186 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm25292-201ENSMUST00000122797 322 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm24438-201ENSMUST00000157893 115 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm23028-201ENSMUST00000158773 265 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm22531-201ENSMUST00000158819 140 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm23190-201ENSMUST00000180307 64 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm23862-201ENSMUST00000180342 94 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm26585-201ENSMUST00000180890 630 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm37343-201ENSMUST00000192542 111 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm45553-201ENSMUST00000209929 507 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm26165-201ENSMUST00000083791 138 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Gm26327-201ENSMUST00000093724 111 ntBASIC3.98□□□□□ -1.77
Hmgb1P63158 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb1P63158 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms