Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm17186-201ENSMUST00000171742 456 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.27□□□□□ -2.05
Cux1P53564 Gm42438-201ENSMUST00000197832 974 ntBASIC2.27□□□□□ -2.05
Cux1P53564 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.27□□□□□ -2.05
Cux1P53564 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.27□□□□□ -2.05
Cux1P53564 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm24406-201ENSMUST00000083026 128 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
Cux1P53564 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Cux1P53564 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Cux1P53564 Gm15147-201ENSMUST00000122263 483 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Cux1P53564 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.27□□□□□ -2.05
Cux1P53564 Gm37418-201ENSMUST00000195031 274 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm43723-201ENSMUST00000196886 189 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm44478-201ENSMUST00000204875 114 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Gm45192-201ENSMUST00000206749 283 ntBASIC2.27□□□□□ -2.05
Cux1P53564 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.27□□□□□ -2.05
Cux1P53564 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Cux1P53564 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cux1P53564 Gm23850-201ENSMUST00000083830 169 ntBASIC2.27□□□□□ -2.05
Cux1P53564 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Cux1P53564 Gm12765-201ENSMUST00000117273 615 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Gm24382-201ENSMUST00000122698 107 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Gm25976-201ENSMUST00000158695 130 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Mir1954-201ENSMUST00000175595 86 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Gm27248-201ENSMUST00000184004 166 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Gm28058-201ENSMUST00000186421 264 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Gm45273-201ENSMUST00000211559 281 ntBASIC2.26□□□□□ -2.05
Cux1P53564 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.26□□□□□ -2.05
Cux1P53564 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.26□□□□□ -2.05
Cux1P53564 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.26□□□□□ -2.05
Cux1P53564 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Cux1P53564 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cux1P53564 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cux1P53564 Gm26049-201ENSMUST00000157313 108 ntBASIC2.25□□□□□ -2.05
Cux1P53564 Gm23897-201ENSMUST00000158110 158 ntBASIC2.25□□□□□ -2.05
Cux1P53564 Gm17062-201ENSMUST00000166987 461 ntBASIC2.25□□□□□ -2.05
Cux1P53564 Gm24154-201ENSMUST00000175261 130 ntBASIC2.25□□□□□ -2.05
Cux1P53564 Gm24715-201ENSMUST00000102377 95 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Gm24342-201ENSMUST00000103907 104 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Gm11965-201ENSMUST00000122017 277 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Gm22228-201ENSMUST00000157364 101 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Mir5136-201ENSMUST00000175573 76 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.24□□□□□ -2.05
Cux1P53564 Gm6059-201ENSMUST00000196903 340 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cux1P53564 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cux1P53564 Gm26064-201ENSMUST00000083381 109 ntBASIC2.24□□□□□ -2.05
Cux1P53564 Gm13901-201ENSMUST00000137252 468 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Gm26099-201ENSMUST00000157248 109 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Mir6351-201ENSMUST00000183826 99 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Gm27233-201ENSMUST00000184030 307 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
Cux1P53564 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.23□□□□□ -2.05
Cux1P53564 Mir343-201ENSMUST00000102360 75 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm2066-201ENSMUST00000118046 389 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm2288-201ENSMUST00000118560 638 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm2318-201ENSMUST00000119623 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm7438-201ENSMUST00000177664 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm7408-201ENSMUST00000178014 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm7386-201ENSMUST00000178020 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm3657-201ENSMUST00000178170 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm7415-201ENSMUST00000178205 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm7398-201ENSMUST00000178589 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm7391-201ENSMUST00000178680 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm2092-201ENSMUST00000178887 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm7375-201ENSMUST00000179232 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm2759-201ENSMUST00000179938 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm3681-201ENSMUST00000179940 639 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Mir7059-201ENSMUST00000184825 59 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm37708-201ENSMUST00000192337 895 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm44458-201ENSMUST00000196594 143 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm43489-201ENSMUST00000196810 993 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm45189-201ENSMUST00000208567 363 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.22□□□□□ -2.05
Cux1P53564 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Cux1P53564 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cux1P53564 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cux1P53564 Gm24624-201ENSMUST00000082617 164 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cux1P53564 Gm13273-201ENSMUST00000119737 159 ntBASIC2.22□□□□□ -2.05
Cux1P53564 Gm22386-201ENSMUST00000158192 129 ntBASIC2.22□□□□□ -2.05
Cux1P53564 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cux1P53564 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms