Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ercc3P49135 Gm37428-201ENSMUST00000193886 137 ntBASIC3.9□□□□□ -1.79
Ercc3P49135 Gm44657-201ENSMUST00000208568 450 ntBASIC3.9□□□□□ -1.79
Ercc3P49135 Gm19032-201ENSMUST00000208584 592 ntBASIC3.9□□□□□ -1.79
Ercc3P49135 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ercc3P49135 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ercc3P49135 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ercc3P49135 AF357428-201ENSMUST00000083815 69 ntBASIC3.9□□□□□ -1.79
Ercc3P49135 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ercc3P49135 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ercc3P49135 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ercc3P49135 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.9□□□□□ -1.79
Ercc3P49135 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ercc3P49135 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ercc3P49135 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ercc3P49135 Gm12782-201ENSMUST00000117519 727 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm12370-201ENSMUST00000117809 604 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm13804-201ENSMUST00000119552 172 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm26866-201ENSMUST00000180414 802 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm27249-201ENSMUST00000185049 328 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ercc3P49135 Gm18982-201ENSMUST00000198118 529 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm29848-201ENSMUST00000203107 295 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.89□□□□□ -1.79
Ercc3P49135 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.89□□□□□ -1.79
Ercc3P49135 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ercc3P49135 Gm23297-201ENSMUST00000083184 127 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Gm26108-201ENSMUST00000083973 191 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.89□□□□□ -1.79
Ercc3P49135 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ercc3P49135 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ercc3P49135 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ercc3P49135 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ercc3P49135 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ercc3P49135 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ercc3P49135 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm24118-201ENSMUST00000103972 126 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm24671-201ENSMUST00000104159 158 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm25507-201ENSMUST00000116981 144 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm11785-201ENSMUST00000120165 601 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm14049-201ENSMUST00000121009 636 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm6762-201ENSMUST00000121769 289 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.88□□□□□ -1.79
Ercc3P49135 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm22166-201ENSMUST00000178419 121 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm22851-201ENSMUST00000178741 94 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm25074-201ENSMUST00000178782 94 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm23288-201ENSMUST00000179213 121 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm28343-201ENSMUST00000185386 112 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm18551-201ENSMUST00000195594 642 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.88□□□□□ -1.79
Ercc3P49135 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.88□□□□□ -1.79
Ercc3P49135 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ercc3P49135 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ercc3P49135 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Ercc3P49135 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Mir669o-201ENSMUST00000103898 96 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 Gm22841-201ENSMUST00000158443 62 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm22532-201ENSMUST00000158822 140 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.87□□□□□ -1.79
Ercc3P49135 Gm28299-201ENSMUST00000189908 339 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm29184-201ENSMUST00000190038 334 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 Gm44324-201ENSMUST00000198517 135 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm9712-201ENSMUST00000210842 311 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.87□□□□□ -1.79
Ercc3P49135 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm10237-201ENSMUST00000078393 273 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.87□□□□□ -1.79
Ercc3P49135 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ercc3P49135 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Ercc3P49135 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ercc3P49135 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ercc3P49135 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ercc3P49135 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm15936-201ENSMUST00000118706 460 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm15760-201ENSMUST00000119553 283 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm11359-201ENSMUST00000120039 567 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm14766-201ENSMUST00000121689 367 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm22633-201ENSMUST00000179834 107 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm18486-201ENSMUST00000184040 298 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm29413-201ENSMUST00000186019 880 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ercc3P49135 Gm29639-201ENSMUST00000188375 580 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 Gm42164-201ENSMUST00000198881 379 ntBASIC3.86□□□□□ -1.79
Ercc3P49135 LOC667541-201ENSMUST00000223408 278 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms